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Nucleic atom dist Protein atom
DT3:D.OP1/1 2.54 GLN287:A.OE1/1
DC8:D.OP1/1 3.41 ARG197:A.NH2/1
DC8:D.O4'/1 3.12 TYR203:A.N/1
DC8:D.O2/1 2.5 ARG154:A.NH2/1
DC8:D.O2/1 2.95 ARG204:A.NH1/1
DC8:D.N3/1 3.19 ARG204:A.NH2/1
DC8:D.N4/1 2.88 ASN149:A.ND2/1
DA22:E.N3/1 3.3 ASN151:A.ND2/1
DG24:E.OP1/1 3.19 VAL269:A.N/1
DG24:E.O5'/1 3.43 ASN149:A.N/1
DG24:E.O4'/1 3.02 ASN149:A.N/1
DT25:E.OP1/1 3.11 GLY247:A.N/1
DT25:E.OP1/1 3.15 LYS249:A.N/1
DT25:E.OP1/1 2.76 VAL250:A.N/1
DC26:E.OP1/1 2.89 GLY245:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC8:D.N4/1 3.21 385:A/1 2.6 ASN149:A.ND2/1
DT9:D.OP1/1 2.96 362:A/1 2.81 ARG197:A.O/1
DT9:D.OP1/1 2.96 362:A/1 3.04 GLY202:A.N/1
DA22:E.N6/1 3.28 399:A/1 2.78 ASN149:A.OD1/1
DG24:E.N2/1 3.17 414:A/1 2.63 SER148:A.OG/1
DG24:E.N2/1 3.17 414:A/1 2.65 TYR203:A.OH/1
DG24:E.N3/1 2.87 414:A/1 2.63 SER148:A.OG/1
DG24:E.N3/1 2.87 414:A/1 2.65 TYR203:A.OH/1
DC26:E.OP2/1 2.4 36:E/1 2.5 CYS241:A.O/1
DC26:E.OP2/1 2.4 36:E/1 2.64 VAL246:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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