Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC7:T.OP1/1 3.21 TYR296:A.OH/1
DC7:T.O2/1 2.86 LYS234:A.NZ/1
DG8:T.OP1/1 2.98 LYS234:A.N/1
DT9:T.OP1/1 3.09 LYS230:A.N/1
DT9:T.OP1/1 2.95 LYS230:A.O/1
DC4:P.OP1/1 3.01 SER109:A.OG/1
DG5:P.OP1/1 3.13 GLY107:A.N/1
DG5:P.OP1/1 3.11 ALA110:A.N/1
DG5:P.OP2/1 2.94 PRO108:A.N/1
DG5:P.OP2/1 3.4 SER109:A.N/1
DC6:P.OP1/1 3.04 GLY105:A.N/1
DC7:P.OP1/1 3.11 ARG254:A.NH2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC7:P.O3'/1 2.86 1004:A/1 2.82 ASP190:A.OD2/1
DC7:P.O3'/1 2.86 1004:A/1 2.75 ARG254:A.NH2/1
DC7:P.O3'/1 2.86 1004:A/1 3 ASP256:A.OD2/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text