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Nucleic atom dist Protein atom
DG5:C.O3'/1 2.98 ASN294:B.OD1/1
DG6:C.OP1/1 2.92 ASN294:B.ND2/1
DC7:C.OP1/1 2.7 TYR296:B.OH/1
DC7:C.O2/1 2.57 LYS234:B.NZ/1
DG8:C.OP1/1 3.28 THR233:B.N/1
DG8:C.OP1/1 2.76 LYS234:B.N/1
DT9:C.OP1/1 2.75 LYS230:B.N/1
DT9:C.OP1/1 2.75 LYS230:B.O/1
DG5:D.OP1/1 3.21 GLY107:B.N/1
DG5:D.OP1/1 2.97 ALA110:B.N/1
DG5:D.OP2/1 3.4 SER109:B.N/1
DC6:D.OP1/1 3.09 GLY105:B.N/1
DC7:D.OP1/1 2.79 ARG254:B.NH2/1
DC7:D.O3'/1 3.18 ASP190:B.OD2/1
DC7:D.O2/1 2.86 TYR271:B.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT9:C.O3'/1 3 12:C/1 3.09 HIS135:B.N/1
DC10:C.OP1/1 2.61 59:C/1 2.78 HIS134:B.N/1
DC10:C.OP1/1 3.02 12:C/1 3.09 HIS135:B.N/1
DC6:D.OP1/1 2.57 1021:B/1 2.47 THR101:B.O/1
DC6:D.OP1/1 2.57 1021:B/1 2.93 VAL103:B.O/1
DC6:D.OP1/1 2.57 1021:B/1 2.54 ILE106:B.O/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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