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Nucleic atom dist Protein atom
DT303:E.OP2/1 3.2 ARG272:A.NH1/1
DG304:E.N7/1 2.37 LYS273:A.NZ/1
DG304:E.O6/1 2.86 LYS273:A.NZ/1
DT306:E.OP1/1 2.47 LYS158:B.NZ/1
DT306:E.OP2/1 2.84 HIS143:B.NE2/1
DT306:E.OP2/1 3.01 LYS155:B.N/1
DT310:E.OP2/1 2.96 ARG131:A.NH1/1
DA311:E.OP1/1 2.89 GLN130:A.N/1
DA311:E.OP2/1 2.7 ARG131:A.N/1
DA312:E.OP2/1 2.58 GLN130:A.NE2/1
DA312:E.OP2/1 2.91 SER145:A.OG/1
DA312:E.N7/1 3.13 GLN141:A.NE2/1
DA312:E.N6/1 3.19 GLN141:A.OE1/1
DT313:E.OP2/1 3.3 LYS150:A.NZ/1
DC315:E.OP1/1 3.29 LYS205:B.NZ/1
DC315:E.OP1/1 2.93 TRP206:B.N/1
DC315:E.O2/1 3.44 ARG203:B.NH1/1
DA316:E.OP1/1 2.78 ARG263:B.NH1/1
DA316:E.N7/1 3.28 ASN270:B.OD1/1
DA316:E.N6/1 3.09 ASN270:B.ND2/1
DC402:F.O5'/1 2.84 TYR265:B.OH/1
DG404:F.N7/1 3.1 LYS273:B.NZ/1
DG405:F.N7/1 2.95 LYS273:B.NZ/1
DG405:F.O6/1 2.38 LYS273:B.NZ/1
DT406:F.OP1/1 2.52 LYS158:A.NZ/1
DT406:F.OP2/1 2.82 HIS143:A.NE2/1
DT406:F.OP2/1 2.96 LYS155:A.N/1
DG407:F.O6/1 3.17 GLN146:A.NE2/1
DA408:F.N6/1 2.94 SER142:A.OG/1
DA408:F.N3/1 3.44 ARG203:B.NH2/1
DA409:F.N6/1 3.16 SER142:A.OG/1
DT411:F.OP1/1 2.99 GLN130:B.N/1
DT411:F.OP2/1 2.67 ARG131:B.N/1
DA412:F.OP2/1 2.63 GLN130:B.NE2/1
DA412:F.OP2/1 2.94 SER145:B.OG/1
DA412:F.N6/1 3.02 GLN141:B.OE1/1
DT413:F.O4/1 3.08 SER142:B.OG/1
DT414:F.O4/1 3.19 GLN146:B.NE2/1
DA415:F.OP1/1 2.98 TRP206:A.N/1
DA416:F.N7/1 3.3 ASN270:A.ND2/1
DA416:F.N6/1 2.65 ASN270:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT310:E.OP2/1 2.58 1078:E/1 2.83 ARG131:A.NH1/1
DT310:E.O5'/1 3.14 1078:E/1 2.83 ARG131:A.NH1/1
DA312:E.OP1/1 2.9 1025:A/1 3.04 ASN149:A.OD1/1
DA312:E.OP1/1 2.9 1025:A/1 2.9 ASN149:A.ND2/1
DA416:F.OP1/1 2.8 1036:F/1 2.85 ARG263:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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