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Nucleic atom dist Protein atom
DC4:C.OP2/1 3.13 TYR410:A.OH/1
DA5:C.OP1/1 2.85 PHE363:A.N/1
DA5:C.OP2/1 2.89 ARG406:A.NH1/1
DA5:C.N3/1 2.72 LYS360:A.NZ/1
DC6:C.OP1/1 3.22 ALA361:A.N/1
DC6:C.OP2/1 2.65 HIS398:A.ND1/1
DC6:C.OP2/1 2.77 SER402:A.OG/1
DA7:C.OP1/1 2.98 SER594:A.N/1
DA7:C.OP2/1 2.82 THR399:A.OG1/1
DA7:C.OP2/1 2.88 ASN401:A.ND2/1
DC8:C.OP2/1 3.31 ASN591:A.ND2/1
DC8:C.O5'/1 3.23 ASN591:A.ND2/1
DC8:C.N4/1 2.78 ASN401:A.OD1/1
DC9:C.N4/1 2.98 GLY590:A.O/1
DC10:C.N4/1 2.76 PRO589:A.O/1
DC12:C.OP1/1 2.77 LYS575:A.NZ/1
DC12:C.OP1/1 2.73 ASN576:A.N/1
DC12:C.OP2/1 3.16 LEU577:A.N/1
DC12:C.OP2/1 2.86 THR578:A.OG1/1
DA13:C.OP2/1 2.92 ARG544:A.NH1/1
DA13:C.N3/1 2.79 LYS446:A.NZ/1
DC14:C.OP1/1 3.09 ARG447:A.N/1
DC14:C.OP2/1 2.69 HIS536:A.ND1/1
DC14:C.N4/1 2.98 ASP543:A.OD2/1
DA15:C.OP2/1 2.58 THR537:A.OG1/1
DC21:D.OP1/1 2.85 GLU524:A.N/1
DT22:D.OP1/1 2.68 ILE521:A.N/1
DG23:D.N7/1 2.94 ARG542:A.NH2/1
DG23:D.O6/1 2.75 ARG542:A.NH2/1
DG24:D.N7/1 2.99 ARG546:A.NH2/1
DG24:D.O6/1 2.72 ARG546:A.NH1/1
DT25:D.O4/1 2.74 LYS547:A.NZ/1
DT29:D.OP1/1 2.67 THR386:A.OG1/1
DT29:D.OP2/1 2.89 HIS385:A.N/1
DT29:D.OP2/1 3.25 THR386:A.N/1
DG30:D.OP1/1 2.84 SER444:A.OG/1
DG30:D.OP1/1 2.88 ILE445:A.N/1
DG30:D.OP1/1 2.89 LYS446:A.N/1
DG30:D.OP2/1 2.8 THR383:A.OG1/1
DG30:D.N7/1 3.31 HIS385:A.NE2/1
DG30:D.O6/1 3.25 HIS385:A.NE2/1
DG31:D.N7/1 2.56 ARG404:A.NH2/1
DG31:D.O6/1 2.7 HIS385:A.NE2/1
DG32:D.N7/1 2.97 ARG404:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:C.OP1/1 3.02 811:C/1 3.05 PHE363:A.O/1
DA5:C.N7/1 2.5 892:C/1 2.89 HIS405:A.NE2/1
DA5:C.N7/1 2.5 892:C/1 3.05 TYR410:A.OH/1
DA7:C.N6/1 2.77 803:A/1 2.5 ASN401:A.O/1
DA13:C.OP1/1 2.63 880:C/1 2.82 PHE449:A.N/1
DA13:C.OP1/1 2.77 888:C/1 3.13 ARG544:A.NH1/1
DA13:C.N7/1 2.78 833:A/1 2.73 ASP543:A.OD2/1
DA15:C.OP2/1 3.09 804:A/1 2.88 ASN539:A.N/1
DA15:C.N7/1 2.61 841:C/1 2.88 ASN539:A.O/1
DC16:C.N4/1 3.26 837:A/1 3.1 ARG542:A.NE/1
DC21:D.OP2/1 2.66 806:D/1 3.01 PHE526:A.N/1
DC21:D.OP2/1 2.66 806:D/1 3 LYS527:A.N/1
DC21:D.OP2/1 2.66 806:D/1 2.97 GLU538:A.OE2/1
DG30:D.OP2/1 2.54 820:D/1 2.63 THR380:A.O/1
DG30:D.OP2/1 2.54 820:D/1 2.83 THR383:A.N/1
DG30:D.OP2/1 2.54 820:D/1 2.78 THR383:A.OG1/1
DG31:D.OP2/1 2.68 870:D/1 2.77 THR383:A.OG1/1
DG32:D.O6/1 2.47 860:D/1 2.66 ARG404:A.NH1/1
DT33:D.O4/1 2.65 825:D/1 2.75 HIS405:A.ND1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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