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Nucleic atom dist Protein atom
DT5:C.OP1/1 3.02 ARG431:B.NH1/1
DT6:C.OP2/1 3.26 GLN278:A.NE2/1
DG8:C.OP1/1 2.88 ARG486:B.NH2/1
DT9:C.OP1/1 3.16 TRP276:B.N/1
DT13:C.O2/1 3.12 ARG400:B.NH1/1
DG15:C.OP1/1 2.93 LYS399:B.N/1
DG15:C.O3'/1 2.96 LYS338:B.NZ/1
DG16:C.OP1/1 2.98 LYS338:B.NZ/1
DC10:D.OP1/1 2.5 LYS126:B.NZ/1
DT11:D.OP1/1 3.3 LYS7:B.NZ/1
DT11:D.OP1/1 2.66 LYS126:B.N/1
DA22:D.OP1/1 2.97 ARG242:B.NH2/1
DA22:D.OP2/1 2.68 ARG242:B.NH2/1
DA24:D.OP1/1 2.76 LYS265:B.NZ/1
DA24:D.N3/1 2.59 ARG400:B.NH2/1
DA25:D.OP1/1 2.99 ASN402:B.N/1
DA25:D.O4'/1 3.21 ARG400:B.NH2/1
DA32:D.OP1/1 3 ARG404:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA24:D.OP1/1 2.52 158:D/1 3.19 GLN360:B.NE2/1
DA24:D.OP1/1 2.52 158:D/1 2.77 TYR395:B.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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