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Nucleic atom dist Protein atom
DA7:B.OP1/1 3.15 TRP412:A.NE1/1
DA7:B.OP2/1 2.51 TYR426:A.OH/1
DC8:B.OP2/1 2.67 THR411:A.N/1
DC8:B.OP2/1 3.1 THR411:A.OG1/1
DT10:B.OP1/1 2.92 LYS587:A.NZ/1
DT10:B.OP2/1 2.66 LYS443:A.NZ/1
DT10:B.O2/1 2.64 LYS532:A.NZ/1
DG12:C.OP1/1 2.98 THR718:A.OG1/1
DG12:C.OP2/1 3.24 THR718:A.N/1
DA17:C.OP1/1 2.85 LYS324:A.NZ/1
DA113:D.OP1/1 2.69 ARG362:A.N/1
DA113:D.OP1/1 2.79 GLY363:A.N/1
DA113:D.OP2/1 2.93 LYS374:A.NZ/1
DA113:D.N3/1 2.73 ARG364:A.NH2/1
DA114:D.OP1/1 2.72 ARG364:A.N/1
DA114:D.OP1/1 3.41 HIS367:A.ND1/1
DA114:D.O4'/1 3.24 ARG364:A.NH2/1
DA114:D.N3/1 3.36 LYS532:A.NZ/1
DG115:D.OP1/1 2.9 THR501:A.OG1/1
DG115:D.OP1/1 3.22 ASP533:A.N/1
DG115:D.OP2/1 3.06 LYS493:A.NZ/1
DT116:D.OP1/1 2.84 ALA489:A.O/1
DT116:D.OP2/1 3.06 ASN491:A.N/1
DT116:D.OP2/1 3.21 ASN491:A.ND2/1
DC117:D.OP1/1 2.81 THR585:A.OG1/1
DC117:D.OP1/1 2.87 LYS587:A.N/1
DC117:D.OP2/1 2.94 ASN574:A.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:B.OP1/1 2.97 1000:A/1 2.93 ARG405:A.NH2/1
DA7:B.N7/1 2.83 14:B/1 3.06 ILE424:A.O/1
DC8:B.N4/1 3.05 935:A/1 2.89 ILE424:A.O/1
DC8:B.N4/1 3.05 935:A/1 2.86 LYS425:A.NZ/1
DT9:B.OP2/1 3.02 17:B/1 3.26 LYS436:A.NZ/1
DT10:B.OP1/1 2.61 18:B/1 2.74 THR591:A.OG1/1
DT10:B.OP1/1 2.61 18:B/1 2.73 ASN722:A.O/1
DT10:B.OP2/1 2.5 25:B/1 2.53 ASN722:A.OD1/1
DG12:C.OP2/1 2.45 62:C/1 3.11 GLY717:A.N/1
DA17:C.OP1/1 2.66 34:C/1 2.94 LYS324:A.NZ/1
DC112:D.O2/1 2.96 1009:A/1 2.8 ARG364:A.NH1/1
DA113:D.N7/1 2.79 1001:D/1 3.46 LYS425:A.NZ/1
DA114:D.OP1/1 2.31 1009:D/1 2.67 ARG364:A.O/1
DC117:D.OP2/1 2.48 994:D/1 2.99 ASN491:A.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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