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Nucleic atom dist Protein atom
DG401:E.O5'/1 3.04 LYS149:A.NZ/1
DG401:E.O4'/1 2.94 LYS149:A.NZ/1
DT404:E.OP2/1 2.56 GLN257:A.NE2/1
DC407:E.O3'/1 3.26 ARG109:A.NH1/1
DC407:E.O3'/1 3.26 ARG109:A.NH2/1
DC407:E.O2/1 2.54 ARG108:A.NE/1
DC407:E.N3/1 3.11 ARG108:A.NH2/1
DT408:E.OP1/1 3.38 ARG109:A.NH1/1
DC409:E.OP1/1 3.13 LYS88:A.NZ/1
DC409:E.OP1/1 2.78 HIS89:A.NE2/1
DG428:I.OP1/1 2.54 LYS56:A.NZ/1
DG428:I.OP2/1 3.01 ASN168:A.N/1
DG428:I.OP2/1 3.04 ARG258:A.NH2/1
DA429:I.OP1/1 2.82 HIS70:A.NE2/1
DA429:I.OP2/1 2.72 LYS56:A.NZ/1
DA429:I.OP2/1 3.3 ASN160:A.ND2/1
DA429:I.O4'/1 3.12 ARG33:A.NH1/1
DA429:I.N3/1 3.02 ARG33:A.NH2/1
DA430:I.O4'/1 2.81 ARG33:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG402:E.OP1/1 2.86 520:E/1 2.96 ALA152:A.N/1
DG402:E.OP1/1 2.55 503:E/1 2.65 ALA256:A.N/1
DC403:E.OP2/1 2.69 555:E/1 2.76 GLN257:A.N/1
DC406:E.O2/1 3.01 532:E/1 3.02 ARG33:A.NH2/1
DA426:I.OP2/1 2.56 560:I/1 2.91 GLN257:A.O/1
DA426:I.OP2/1 2.69 551:I/1 2.75 ALA259:A.N/1
DG428:I.OP2/1 2.62 504:I/1 2.82 ARG258:A.NH1/1
DG428:I.N3/1 3.16 533:A/1 2.8 PHE110:A.O/1
DA429:I.OP1/1 2.66 545:I/1 2.87 LYS56:A.N/1
DA429:I.OP2/1 2.94 556:I/1 3.34 ASN160:A.ND2/1
DA429:I.N7/1 3.12 833:A/1 2.98 ARG258:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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