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Nucleic atom dist Protein atom
DG401:F.O5'/1 2.89 LYS149:B.NZ/1
DG401:F.O4'/1 3.05 LYS149:B.NZ/1
DT404:F.OP2/1 2.5 GLN257:B.NE2/1
DC407:F.O3'/1 2.99 ARG109:B.NH1/1
DC407:F.O2/1 2.7 ARG108:B.NE/1
DC407:F.N3/1 3.22 ARG108:B.NH2/1
DT408:F.OP1/1 3.25 ARG109:B.NH1/1
DC409:F.OP1/1 2.67 HIS89:B.NE2/1
DG428:J.OP1/1 2.69 LYS56:B.NZ/1
DG428:J.OP2/1 3.16 ASN168:B.N/1
DG428:J.OP2/1 2.79 ARG258:B.NH2/1
DG428:J.O3'/1 3.32 HIS70:B.NE2/1
DA429:J.OP1/1 3.08 HIS70:B.NE2/1
DA429:J.OP2/1 2.7 LYS56:B.NZ/1
DA429:J.OP2/1 2.97 ASN160:B.ND2/1
DA429:J.O4'/1 3.03 ARG33:B.NH1/1
DA429:J.N3/1 2.87 ARG33:B.NH2/1
DA430:J.O4'/1 3.14 ARG33:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG402:F.OP1/1 2.63 586:F/1 3.28 ALA152:B.N/1
DG402:F.OP1/1 2.52 569:F/1 2.83 ALA256:B.N/1
DC403:F.OP2/1 2.61 618:F/1 2.63 GLN257:B.N/1
DT404:F.O4/1 2.91 579:B/1 2.71 ALA256:B.O/1
DA426:J.OP2/1 2.65 623:J/1 2.94 GLN257:B.O/1
DA426:J.OP2/1 2.77 614:J/1 3.39 ARG258:B.NE/1
DA426:J.OP2/1 2.77 614:J/1 3.11 ALA259:B.N/1
DG428:J.OP2/1 2.84 570:B/1 2.58 ARG258:B.NH1/1
DG428:J.O6/1 3.2 587:B/1 3.17 ARG108:B.NH1/1
DA429:J.OP1/1 2.54 608:J/1 2.87 LYS56:B.N/1
DA429:J.OP2/1 2.8 619:J/1 3.16 ASN160:B.ND2/1
DA429:J.N7/1 2.99 777:B/1 2.72 ARG258:B.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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