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Nucleic atom dist Protein atom
DG401:H.O5'/1 3.3 LYS149:D.NZ/1
DG401:H.O4'/1 3.08 LYS149:D.NZ/1
DC407:H.O2/1 2.73 ARG108:D.NE/1
DC407:H.N3/1 3.13 ARG108:D.NH2/1
DT408:H.O3'/1 3.04 HIS89:D.NE2/1
DC409:H.OP1/1 3.15 LYS88:D.NZ/1
DC409:H.OP1/1 2.75 HIS89:D.NE2/1
DG428:L.OP1/1 2.67 LYS56:D.NZ/1
DG428:L.OP2/1 3.1 ASN168:D.N/1
DG428:L.OP2/1 3.07 ARG258:D.NH2/1
DG428:L.N2/1 3.19 ARG33:D.NH1/1
DG428:L.N3/1 3.52 ARG33:D.NH1/1
DA429:L.OP1/1 2.94 HIS70:D.NE2/1
DA429:L.OP2/1 2.74 LYS56:D.NZ/1
DA429:L.OP2/1 3.07 ASN160:D.ND2/1
DA429:L.O4'/1 3.06 ARG33:D.NH1/1
DA429:L.N3/1 2.92 ARG33:D.NH2/1
DA430:L.O4'/1 2.99 ARG33:D.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG402:H.OP1/1 2.89 711:H/1 3 ALA152:D.N/1
DG402:H.OP1/1 2.63 695:H/1 2.63 ALA256:D.N/1
DC403:H.OP2/1 2.79 746:D/1 2.68 GLN257:D.N/1
DT404:H.O4/1 2.69 705:H/1 2.72 ALA256:D.O/1
DA426:L.OP2/1 2.69 751:L/1 2.77 GLN257:D.O/1
DA426:L.OP2/1 3.25 742:L/1 2.83 ALA259:D.N/1
DG428:L.OP2/1 2.68 696:L/1 2.78 ARG258:D.NH1/1
DG428:L.O6/1 3.19 712:D/1 3.03 ARG108:D.NH1/1
DG428:L.N3/1 2.99 724:L/1 3.07 ARG33:D.NH1/1
DG428:L.N3/1 2.99 724:L/1 3.07 PHE110:D.O/1
DA429:L.OP1/1 2.54 736:L/1 2.83 LYS56:D.N/1
DA429:L.OP2/1 2.85 747:L/1 3.37 ASN160:D.ND2/1
DA429:L.N7/1 3.18 759:D/1 3.14 ARG258:D.NH1/1
DA429:L.N6/1 3.4 759:D/1 3.14 ARG258:D.NH1/1
DA430:L.OP2/1 2.96 764:L/1 3.04 ASN160:D.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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