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Nucleic atom dist Protein atom
DC403:C.OP2/1 2.86 PHE34:A.N/1
DG404:C.OP2/1 2.93 PHE36:A.N/1
DG405:C.OP1/1 2.95 LEU95:A.N/1
DG405:C.OP2/1 2.9 ARG49:A.NE/1
DG405:C.O6/1 2.58 LYS45:A.NZ/1
DT406:C.OP1/1 2.81 ARG104:A.NH2/1
DA412:C.OP2/1 2.96 PHE234:B.N/1
DG413:C.OP2/1 2.78 PHE236:B.N/1
DG414:C.OP1/1 2.68 LEU295:B.N/1
DG414:C.OP2/1 2.9 ARG249:B.NE/1
DG414:C.O6/1 3.04 LYS245:B.NZ/1
DG420:D.OP1/1 2.89 ARG273:B.NE/1
DG420:D.OP1/1 2.64 ARG273:B.NH2/1
DG420:D.OP2/1 2.98 ARG280:B.NH2/1
DG420:D.N7/1 3.27 ARG250:B.NH1/1
DA422:D.N6/1 3.12 GLU242:B.OE1/1
DT428:D.OP1/1 2.62 GLN77:A.NE2/1
DG429:D.OP1/1 2.66 ARG73:A.NE/1
DG429:D.OP1/1 2.91 ARG73:A.NH2/1
DG429:D.OP1/1 3.18 ARG74:A.NH1/1
DG429:D.OP2/1 3.08 ARG80:A.NH1/1
DG429:D.OP2/1 2.59 ARG80:A.NH2/1
DG429:D.N7/1 3.25 ARG50:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG404:C.OP2/1 2.93 624:A/1 2.89 HIS35:A.ND1/1
DG404:C.N7/1 3.14 628:A/1 3.01 LYS45:A.NZ/1
DG405:C.OP1/1 2.68 610:C/1 2.78 LYS53:A.NZ/1
DG405:C.OP1/1 2.68 610:C/1 3.15 LEU95:A.O/1
DA412:C.OP2/1 2.38 619:C/1 3 PHE234:B.O/1
DA412:C.O5'/1 2.83 619:C/1 3 PHE234:B.O/1
DG413:C.OP2/1 3.02 612:B/1 2.53 HIS235:B.ND1/1
DG413:C.N7/1 2.75 613:B/1 2.72 LYS245:B.NZ/1
DG420:D.OP2/1 2.53 614:D/1 2.92 GLY243:B.O/1
DG420:D.OP2/1 2.53 614:D/1 2.59 ARG250:B.NH2/1
DA421:D.OP1/1 2.79 635:B/1 2.33 ASP229:B.OD1/1
DT428:D.OP2/1 2.31 633:A/1 2.07 ARG50:A.NE/1
DG429:D.OP2/1 2.81 631:A/1 2.65 GLY43:A.O/1
DG429:D.OP2/1 2.81 631:A/1 2.58 ARG50:A.NH2/1
DA430:D.OP1/1 3.05 606:A/1 2.47 ARG73:A.NH2/1
DA430:D.N7/1 2.91 627:D/1 2.79 GLU42:A.OE1/1
DA430:D.N6/1 2.72 627:D/1 2.79 GLU42:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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