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Nucleic atom dist Protein atom
DA3:E.OP1/1 2.66 ARG180:C.NE/1
DA4:E.OP2/1 2.63 THR187:C.OG1/1
DT5:E.OP2/1 3.21 ASN184:C.ND2/1
DA13:E.OP1/1 2.81 ASN248:B.ND2/1
DA13:E.OP2/1 3.26 THR245:B.OG1/1
DA14:E.OP2/1 2.92 LYS241:B.NZ/1
DA3:A.OP1/1 2.66 ARG180:B.NE/1
DA4:A.OP2/1 2.63 THR187:B.OG1/1
DT5:A.OP2/1 3.21 ASN184:B.ND2/1
DA13:A.OP1/1 2.81 ASN248:C.ND2/1
DA13:A.OP2/1 3.26 THR245:C.OG1/1
DA14:A.OP2/1 2.92 LYS241:C.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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