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Nucleic atom dist Protein atom
DT2:B.OP2/1 3.17 ALA262:A.N/1
DT7:B.O2/1 3.18 ARG112:A.NE/1
DT8:B.OP1/1 3.08 LYS113:A.NZ/1
DA17:C.OP1/1 2.63 LYS258:A.NZ/1
DG19:C.OP1/1 2.72 LYS60:A.NZ/1
DG19:C.OP2/1 3.16 ASN174:A.N/1
DG19:C.OP2/1 2.91 ARG264:A.NH1/1
DG19:C.OP2/1 2.89 ARG264:A.NH2/1
DG19:C.N2/1 3.28 ARG76:A.NH1/1
DT20:C.OP1/1 3.07 HIS74:A.NE2/1
DT20:C.OP2/1 2.55 LYS60:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT2:B.O5'/1 2.89 343:A/1 2.76 GLY263:A.N/1
DT7:B.OP1/1 2.45 118:B/1 2.99 ASN32:A.OD1/1
DT20:C.OP2/1 2.88 329:A/1 2.55 LEU164:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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