Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG6:C.N7/1 3.25 ARG56:B.NH2/1
DG7:C.O6/1 3.24 ARG54:B.NH2/1
DA8:C.OP2/1 3.04 ARG246:A.NE/1
DA9:C.OP1/1 2.77 GLN220:A.OE1/1
DA9:C.OP2/1 3.15 GLN247:A.NE2/1
DG11:C.OP1/1 2.74 LYS123:A.N/1
DG11:C.OP2/1 2.31 TYR36:A.OH/1
DA13:C.N6/1 2.74 GLU39:A.OE2/1
DT3:D.O4/1 3.2 ARG35:A.NH2/1
DC7:D.OP1/1 2.52 GLN274:B.NE2/1
DC7:D.OP2/1 3.19 GLN306:B.OE1/1
5IU9:D.O5'/1 3.09 TYR57:B.OH/1
5IU9:D.OP1/1 3.13 LYS144:B.N/1
5IU9:D.OP2/1 2.3 TYR57:B.OH/1
DC11:D.N4/1 3.01 GLU60:B.OE1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text