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Nucleic atom dist Protein atom
DC2:A.N4/1 3.06 ARG115:C.NH1/1
DC3:A.OP2/1 2.7 SER144:C.OG/1
DA5:A.OP1/1 2.97 GLN254:D.NE2/1
DA5:A.OP2/1 2.72 LYS148:C.NZ/1
DA5:A.OP2/1 2.83 ARG149:C.NH2/1
DA5:A.OP2/1 2.76 ARG149:C.NH2/1
DA5:A.O5'/1 3.02 ARG149:C.NH2/1
DA5:A.O5'/1 3.32 ARG149:C.NH2/1
DA5:A.N6/1 2.96 ASP145:C.OD1/1
DC6:A.OP1/1 2.72 HIS250:D.ND1/1
DC6:A.N4/1 3.3 ARG149:C.NH1/1
DG7:A.O6/1 2.65 ARG249:D.NH2/1
DC8:A.N4/1 3.05 ARG249:D.NH2/1
DG9:A.OP1/1 2.7 HIS222:D.ND1/1
DG9:A.N7/1 2.95 ARG243:D.NH1/1
DG9:A.O6/1 2.75 ARG243:D.NH2/1
DG11:A.OP2/1 2.7 SER214:D.OG/1
DG11:A.N7/1 2.83 HIS218:D.NE2/1
DG12:A.N7/1 2.82 ARG215:D.NH1/1
DG12:A.O6/1 2.7 ARG215:D.NH2/1
DT21:B.O2/1 3.09 THR220:D.OG1/1
DT21:B.N3/1 2.92 SER216:D.OG/1
DC22:B.N4/1 2.81 ASP217:D.OD1/1
DC23:B.OP2/1 2.8 SER244:D.OG/1
DA25:B.OP1/1 2.91 GLN154:C.NE2/1
DA25:B.OP2/1 3 LYS248:D.NZ/1
DA25:B.N6/1 3.02 ASP245:D.OD1/1
DC26:B.OP1/1 2.69 HIS150:C.ND1/1
DC26:B.N4/1 3.16 ARG249:D.NH1/1
DG27:B.O6/1 2.65 ARG149:C.NH2/1
DG27:B.O6/1 3.03 ARG249:D.NH1/1
DC28:B.N4/1 3.06 ARG149:C.NH2/1
DG29:B.OP1/1 2.79 HIS122:C.ND1/1
DG29:B.N7/1 2.93 ARG143:C.NH1/1
DG29:B.O6/1 2.74 ARG143:C.NH2/1
DG31:B.OP2/1 2.78 SER114:C.OG/1
DG31:B.N7/1 2.95 HIS118:C.NE2/1
DG32:B.N7/1 2.48 ARG115:C.NH2/1
DG32:B.O6/1 2.63 ARG115:C.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:A.N4/1 3.21 1361:C/1 2.82 ASP145:C.OD2/1
DA5:A.OP1/1 2.69 1047:A/1 2.86 LYS148:C.NZ/1
DC6:A.OP2/1 2.66 1017:A/1 2.73 ARG149:C.NH1/1
DC6:A.OP2/1 2.73 1031:A/1 3.12 ARG149:C.NH1/1
DC6:A.OP2/1 2.73 1031:A/1 2.98 ARG149:C.NH2/1
DC6:A.OP2/1 2.73 1031:A/1 2.96 ARG249:D.O/1
DC6:A.OP2/1 2.73 1031:A/1 2.95 ARG249:D.O/1
DC6:A.OP2/1 2.73 1031:A/1 2.83 GLN254:D.NE2/1
DC6:A.O3'/1 2.95 1251:A/1 2.93 ARG239:D.NH2/1
DG7:A.OP1/1 2.51 1081:A/1 2.8 ARG239:D.NE/1
DG7:A.OP1/1 2.74 1251:A/1 2.93 ARG239:D.NH2/1
DG7:A.OP1/1 3.07 1089:D/1 2.89 ALA242:D.N/1
DG7:A.OP1/1 3.07 1089:D/1 3 GLU246:D.OE1/1
DG7:A.OP2/1 2.79 1007:A/1 2.88 GLU246:D.O/1
DG7:A.N7/1 2.83 1062:A/1 3.14 ARG249:D.NH2/1
DC8:A.OP1/1 2.81 1231:A/1 3.03 THR225:D.O/1
DC8:A.OP2/1 2.85 1018:D/1 2.54 GLU246:D.OE2/1
DG9:A.OP2/1 2.9 1005:A/1 2.94 HIS218:D.O/1
DG9:A.OP2/1 2.69 1013:A/1 2.82 THR221:D.OG1/1
DG9:A.OP2/1 2.69 1013:A/1 2.99 ARG243:D.NH1/1
DT10:A.OP1/1 2.66 1252:A/1 2.87 LYS202:D.NZ/1
DT10:A.OP2/1 2.7 1092:D/1 3 LYS202:D.NZ/1
DT10:A.OP2/1 2.7 1092:D/1 3.01 ARG211:D.NE/1
DT10:A.OP2/1 2.7 1092:D/1 3.33 ARG211:D.NH2/1
DT10:A.OP2/1 2.7 1092:D/1 2.67 ASN212:D.O/1
DT10:A.OP2/1 2.9 1022:D/1 2.9 SER214:D.N/1
DT21:B.O5'/1 3.04 1078:D/1 2.69 ASP217:D.OD1/1
DC22:B.OP2/1 2.49 1108:B/1 2.95 ARG224:D.NH2/1
DC23:B.N4/1 3.24 1078:D/1 2.69 ASP217:D.OD1/1
DC24:B.OP2/1 2.77 1079:D/1 2.76 SER244:D.OG/1
DA25:B.OP1/1 2.73 1063:D/1 2.72 LYS248:D.NZ/1
DA25:B.OP2/1 2.81 1242:B/1 3.4 ARG249:D.NH1/1
DC26:B.OP2/1 2.65 1035:B/1 3 ARG149:C.O/1
DC26:B.OP2/1 2.65 1035:B/1 2.98 ARG149:C.O/1
DC26:B.OP2/1 2.65 1035:B/1 2.87 ARG149:C.O/1
DC26:B.OP2/1 2.65 1035:B/1 2.75 ARG149:C.O/1
DC26:B.OP2/1 2.65 1035:B/1 2.95 GLN154:C.NE2/1
DG27:B.OP1/1 2.72 1075:C/1 2.85 ARG139:C.NE/1
DG27:B.OP1/1 2.78 1248:B/1 3.1 ARG139:C.NH2/1
DG27:B.OP1/1 2.72 1075:C/1 2.71 LYS140:C.O/1
DG27:B.OP1/1 2.86 1015:C/1 2.81 ALA142:C.N/1
DG27:B.OP2/1 2.71 1021:B/1 2.74 GLU146:C.O/1
DG27:B.N7/1 2.73 1042:B/1 3.13 ARG149:C.NE/1
DG27:B.N7/1 2.73 1042:B/1 2.89 ARG149:C.NH2/1
DG27:B.N7/1 2.73 1042:B/1 3.06 ARG149:C.NH2/1
DC28:B.OP1/1 2.79 1120:B/1 3.11 THR125:C.O/1
DC28:B.OP2/1 2.7 1055:C/1 2.54 GLU146:C.OE2/1
DG29:B.OP2/1 2.84 1012:B/1 2.97 HIS118:C.O/1
DG29:B.OP2/1 2.68 1023:B/1 2.72 THR121:C.OG1/1
DG29:B.OP2/1 2.68 1023:B/1 2.99 ARG143:C.NH1/1
DT30:B.OP1/1 2.51 1127:B/1 3.05 LYS102:C.NZ/1
DT30:B.OP1/1 2.96 1161:C/1 3.04 LYS102:C.NZ/1
DT30:B.OP1/1 2.96 1161:C/1 2.83 ARG111:C.NH2/1
DT30:B.OP2/1 2.91 1085:C/1 3.37 LYS102:C.NZ/1
DT30:B.OP2/1 2.91 1085:C/1 2.8 ARG111:C.NE/1
DT30:B.OP2/1 2.91 1085:C/1 2.7 ASN112:C.O/1
DT30:B.OP2/1 2.84 1053:B/1 2.92 SER114:C.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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