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Nucleic atom dist Protein atom
U37:E.N3/1 2.85 GLU19:F.OE1/1
U38:E.N3/1 3.17 ASN16:F.OD1/1
U38:E.O4/1 3.1 LYS80:F.NZ/1
G39:E.O2'/1 2.7 LYS50:F.O/1
G39:E.N7/1 3.27 ASN15:F.OD1/1
G39:E.O6/1 2.87 ASN16:F.N/1
G39:E.O6/1 3.26 GLY53:F.O/1
G39:E.N2/1 3.01 GLU19:F.OE2/1
C40:E.O2'/1 2.52 LYS88:F.NZ/1
C40:E.O2/1 3.29 LYS88:F.N/1
C40:E.N3/1 3.26 LYS88:F.N/1
C40:E.N4/1 3.04 GLN85:F.OE1/1
C42:E.N3/1 2.94 ASP92:F.N/1
C42:E.N4/1 3.03 ASP90:F.O/1
G46:E.OP1/1 2.86 LEU49:F.N/1
G46:E.N7/1 3.12 ARG52:F.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
A36:E.N6/1 3.11 241:F/1 2.72 GLU19:F.OE1/1
U37:E.O2'/1 2.6 201:E/1 2.61 LEU49:F.O/1
G39:E.N3/1 2.94 201:E/1 2.61 LEU49:F.O/1
C40:E.OP2/1 3.01 240:F/1 2.85 TYR13:F.OH/1
C40:E.OP2/1 2.52 249:E/1 3.37 LYS88:F.NZ/1
C40:E.O2/1 2.84 233:E/1 3.08 THR89:F.N/1
A41:E.N7/1 2.78 233:E/1 3.08 THR89:F.N/1
C42:E.O2/1 3.02 207:F/1 2.67 ILE93:F.N/1
U43:E.OP2/1 2.73 302:F/1 2.58 ASP92:F.OD2/1
G46:E.OP2/1 2.66 227:E/1 3.12 LYS50:F.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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