Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC502:C.OP2/1 2.69 LYS236:B.N/1
DC502:C.N4/1 2.57 ASP234:B.OD1/1
DA503:C.OP2/1 2.63 TYR235:B.OH/1
DG504:C.OP2/1 2.81 GLN241:B.OE1/1
DG504:C.N7/1 2.86 ARG232:B.NH2/1
DG504:C.O6/1 2.8 ARG232:B.NH1/1
DA505:C.OP1/1 3.21 ASN270:B.ND2/1
DA505:C.OP2/1 2.87 ASN270:B.OD1/1
DG508:C.N7/1 2.92 ARG272:B.NH2/1
DG508:C.O6/1 3.25 ARG272:B.NH1/1
DG513:C.OP1/1 3.3 ARG51:A.NH1/1
DG513:C.OP1/1 3.14 ARG344:B.NH1/1
DA514:C.OP2/1 2.84 ARG51:A.N/1
DG515:C.OP2/1 2.92 GLY21:A.O/1
DG515:C.N7/1 2.92 ARG75:A.NH1/1
DG515:C.O6/1 3.05 ARG75:A.NH1/1
DG515:C.O6/1 2.74 ARG75:A.NH2/1
DA516:C.OP2/1 2.78 SER24:A.OG/1
DA516:C.OP2/1 3.26 LYS104:A.NZ/1
DA516:C.N6/1 3.14 ARG75:A.NH1/1
DC517:C.OP2/1 3.07 ASN142:A.ND2/1
DA518:C.N7/1 2.7 LYS28:A.NZ/1
DC551:D.O5'/1 2.3 ASP34:A.O/1
DG553:D.OP1/1 2.5 TYR118:A.OH/1
DG553:D.OP2/1 2.82 TYR35:A.OH/1
DG553:D.N7/1 2.76 ARG32:A.NH2/1
DA554:D.N7/1 3.51 ARG32:A.NH1/1
DA554:D.N6/1 3.4 ARG32:A.NH1/1
DA554:D.N6/1 3.31 ARG32:A.NH2/1
DA555:D.OP2/1 3.1 ASN70:A.ND2/1
DG558:D.N7/1 2.9 ARG72:A.NH1/1
DG558:D.O6/1 2.89 ARG72:A.NH2/1
DC562:D.OP1/1 2.97 ARG144:A.NH2/1
DA563:D.OP1/1 2.96 ARG144:A.NH1/1
DA563:D.OP1/1 2.96 ARG251:B.NH1/1
DC564:D.OP2/1 3.04 ARG251:B.N/1
DC564:D.OP2/1 3.04 LYS254:B.NZ/1
DG565:D.N7/1 2.55 ARG275:B.NH1/1
DG565:D.O6/1 2.58 ARG275:B.NH2/1
DA566:D.OP2/1 2.74 SER224:B.OG/1
DA566:D.OP2/1 3.41 LYS304:B.NZ/1
DA566:D.N6/1 2.75 ARG275:B.NH1/1
DC567:D.OP2/1 3.06 ASN342:B.ND2/1
DG568:D.N7/1 2.83 LYS228:B.NZ/1
DT569:D.O4/1 2.75 LYS228:B.NZ/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA503:C.N7/1 2.57 1127:C/1 3 ARG232:B.NH1/1
DA503:C.N7/1 2.57 1127:C/1 3.19 ASP234:B.OD2/1
DA503:C.N6/1 2.71 1127:C/1 3 ARG232:B.NH1/1
DA503:C.N6/1 2.71 1127:C/1 3.19 ASP234:B.OD2/1
DG504:C.OP1/1 2.81 1122:C/1 3.15 THR288:B.N/1
DG504:C.OP1/1 2.81 1122:C/1 2.94 THR288:B.OG1/1
DG504:C.OP2/1 2.55 1025:C/1 2.71 SER243:B.OG/1
DG504:C.OP2/1 3.01 1016:B/1 2.64 LEU244:B.N/1
DA505:C.OP2/1 2.86 1140:B/1 2.71 ILE285:B.N/1
DA505:C.OP2/1 2.86 1140:B/1 2.79 ILE285:B.O/1
DC507:C.N4/1 3.16 1144:C/1 3.34 ARG272:B.NH1/1
DA514:C.N7/1 2.76 1198:C/1 2.92 ASP77:A.OD1/1
DA514:C.N6/1 3.23 1198:C/1 2.92 ASP77:A.OD1/1
DA516:C.OP1/1 2.45 1112:C/1 2.66 ASN142:A.OD1/1
DA516:C.OP2/1 2.69 1006:C/1 2.93 ILE25:A.N/1
DA516:C.OP2/1 2.69 1006:C/1 3.14 LYS104:A.NZ/1
DA516:C.OP2/1 2.69 1006:C/1 2.76 ASN142:A.OD1/1
DA516:C.N7/1 2.88 1004:A/1 2.82 SER47:A.OG/1
DA516:C.N6/1 3.07 1011:A/1 3.07 ARG75:A.NH1/1
DA516:C.N6/1 3.07 1011:A/1 2.83 ASP81:A.OD1/1
DC517:C.OP1/1 2.91 1113:A/1 2.61 GLN139:A.O/1
DC517:C.OP1/1 2.91 1113:A/1 3.08 LYS143:A.NZ/1
DC517:C.OP2/1 2.55 1092:C/1 2.85 ALA27:A.N/1
DC517:C.OP2/1 2.55 1092:C/1 3.13 ALA27:A.O/1
DC517:C.N4/1 2.9 1075:A/1 2.89 TYR26:A.OH/1
DC517:C.N4/1 2.9 1075:A/1 2.82 THR83:A.OG1/1
DA518:C.OP2/1 2.61 1007:C/1 2.89 LEU29:A.N/1
DA518:C.OP2/1 2.68 1148:C/1 2.87 LEU29:A.O/1
DA518:C.OP2/1 2.61 1007:C/1 3.28 GLN139:A.NE2/1
DG519:C.N7/1 2.53 1138:C/1 3.13 LYS28:A.NZ/1
DG553:D.N7/1 3.3 1207:A/1 2.89 ARG32:A.NH2/1
DG553:D.N7/1 3.3 1207:A/1 2.93 ASP34:A.OD2/1
DA554:D.OP1/1 2.6 1110:D/1 3.01 THR88:A.N/1
DA554:D.OP1/1 2.6 1110:D/1 2.69 THR88:A.OG1/1
DA554:D.OP2/1 2.99 1041:A/1 2.65 SER43:A.OG/1
DA554:D.OP2/1 3.2 1008:A/1 2.94 LEU44:A.N/1
DA555:D.OP2/1 2.69 1096:D/1 2.78 ILE85:A.N/1
DA566:D.OP1/1 3.11 1061:B/1 2.74 ASN342:B.O/1
DA566:D.OP2/1 2.83 1021:B/1 3.07 ILE225:B.N/1
DA566:D.OP2/1 2.83 1021:B/1 3.2 LYS304:B.NZ/1
DA566:D.OP2/1 2.83 1021:B/1 2.67 ASN342:B.OD1/1
DA566:D.N7/1 2.81 1079:D/1 2.93 SER247:B.OG/1
DA566:D.N6/1 2.78 1146:D/1 2.83 ARG275:B.NH1/1
DA566:D.N6/1 2.78 1146:D/1 3.05 ASP281:B.OD2/1
DC567:D.OP1/1 3.03 1005:B/1 2.53 GLN339:B.O/1
DC567:D.OP2/1 2.83 1158:B/1 2.5 ALA227:B.N/1
DC567:D.OP2/1 2.83 1158:B/1 2.89 ALA227:B.O/1
DC567:D.N4/1 3.17 1046:B/1 2.91 TYR226:B.OH/1
DC567:D.N4/1 3.17 1046:B/1 3.01 THR283:B.OG1/1
DG568:D.OP1/1 2.48 1034:D/1 2.84 GLN339:B.OE1/1
DG568:D.OP1/1 3 1125:D/1 3.02 GLN339:B.OE1/1
DG568:D.OP1/1 2.48 1034:D/1 3.14 ASN352:B.ND2/1
DG568:D.OP2/1 2.77 1018:D/1 3.09 LEU229:B.N/1
DG568:D.OP2/1 2.88 1055:B/1 2.64 LEU229:B.O/1
DG568:D.OP2/1 2.77 1018:D/1 2.94 GLN339:B.NE2/1
DG568:D.OP2/1 2.77 1018:D/1 3.08 ASN352:B.OD1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text