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Nucleic atom dist Protein atom
DG1:E.O5'/1 2.8 ARG185:D.NH2/1
DA2:E.OP1/1 2.89 HIS33:A.ND1/1
DA2:E.OP2/1 2.79 THR30:A.OG1/1
DA2:E.N7/1 3.32 ARG185:D.NH1/1
DA2:E.N7/1 2.89 ARG185:D.NH2/1
DT3:E.O4/1 2.92 ARG185:D.NH1/1
DT8:E.OP2/1 3.23 ARG132:D.NE/1
DT8:E.O2/1 2.38 ARG19:A.NH2/1
DA10:E.OP1/1 3.41 ARG19:A.N/1
DA12:E.OP2/1 3.08 LYS45:B.NZ/1
DA12:E.O3'/1 2.99 LYS46:A.NZ/1
DG13:E.OP1/1 2.86 LYS46:A.NZ/1
DG14:E.OP1/1 2.83 ARG39:B.NE/1
DG14:E.OP2/1 2.7 THR35:B.OG1/1
DG14:E.N7/1 2.69 LYS38:B.NZ/1
DG15:E.O6/1 2.72 LYS38:B.NZ/1
DT20:E.O2/1 3.38 ARG135:C.NH1/1
DT21:E.OP1/1 3.11 PHE136:C.N/1
DT21:E.O5'/1 3.33 PHE136:C.N/1
DT21:E.O2/1 2.95 GLY133:C.N/1
DA22:E.OP1/1 3.13 GLN175:C.OE1/1
DA22:E.N7/1 2.96 ASN182:C.OD1/1
DA22:E.N6/1 3.36 ASN182:C.OD1/1
DA22:E.N6/1 3.07 ASN182:C.ND2/1
DA22:E.N3/1 2.89 ARG132:C.NE/1
DC23:E.O4'/1 2.93 ARG132:C.NH2/1
DC23:E.O2/1 2.8 ARG132:C.NH2/1
DC27:F.O5'/1 3.24 LYS177:C.NZ/1
DC28:F.OP1/1 3.07 ARG184:C.NH2/1
DG29:F.OP1/1 2.44 TYR156:C.OH/1
DG29:F.OP2/1 2.55 ARG184:C.NH1/1
DG31:F.N7/1 3.09 ARG185:C.NH1/1
DG31:F.O6/1 2.53 ARG185:C.NH2/1
DT32:F.O4/1 2.89 ARG185:C.NH2/1
DA35:F.OP1/1 2.6 THR66:B.OG1/1
DA35:F.O4'/1 3.01 ARG132:C.O/1
DA35:F.O3'/1 3.27 HIS134:C.NE2/1
DA35:F.N3/1 3.25 ARG135:C.NH1/1
DT36:F.OP1/1 3.19 LYS40:B.NZ/1
DT36:F.OP2/1 2.7 SER37:B.OG/1
DT36:F.O2/1 2.52 ARG135:C.NH2/1
DA43:F.OP1/1 2.94 ARG19:B.N/1
DA43:F.OP2/1 3.15 ARG18:B.NE/1
DA43:F.OP2/1 2.86 ARG18:B.NH2/1
DT44:F.OP1/1 3.18 ILE21:B.N/1
DT45:F.OP1/1 2.68 LYS45:A.NZ/1
DT45:F.O3'/1 2.9 LYS46:B.NZ/1
DA46:F.OP1/1 2.88 LYS46:B.NZ/1
DG47:F.OP1/1 2.97 ARG39:A.NE/1
DG47:F.OP1/1 3.2 ARG39:A.NH2/1
DG47:F.OP2/1 2.95 THR35:A.OG1/1
DG48:F.N3/1 3.08 ARG135:D.NH2/1
DT49:F.O4'/1 3.23 ARG135:D.NH2/1
DA51:F.OP1/1 2.88 GLN175:D.NE2/1
DA51:F.N7/1 3.19 ASN182:D.ND2/1
DA51:F.N6/1 3.17 ASN182:D.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:E.N7/1 2.64 29:E/1 3.04 LYS38:A.NZ/1
DA5:E.N6/1 2.55 29:E/1 3.04 LYS38:A.NZ/1
DG13:E.OP2/1 2.94 107:B/1 2.91 LYS38:B.O/1
DA22:E.OP2/1 2.61 30:E/1 3.07 GLN175:C.O/1
DA22:E.OP2/1 2.73 31:E/1 3.18 ASN178:C.OD1/1
DA46:F.OP2/1 2.55 55:F/1 2.78 LYS38:A.O/1
DG48:F.O4'/1 2.66 61:F/1 2.91 ARG19:A.NH1/1
DG48:F.O4'/1 2.66 61:F/1 2.76 ARG135:D.NH2/1
DG48:F.N7/1 2.84 102:A/1 2.66 LYS38:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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