Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC302:B.OP2/1 2.45 LYS131:A.N/1
DA303:B.OP1/1 2.68 LYS213:A.NZ/1
DA303:B.N7/1 2.66 TYR130:A.OH/1
DA303:B.N6/1 3.06 TYR130:A.OH/1
DA304:B.OP2/1 2.81 ILE178:A.N/1
DA304:B.N7/1 2.94 GLN135:A.NE2/1
DA304:B.N6/1 3.12 GLN135:A.OE1/1
DG308:B.N7/1 3.05 ARG165:A.NH1/1
DG308:B.O6/1 2.58 ARG165:A.NH2/1
DT309:B.O4/1 2.99 ARG167:A.NH1/1
DA313:B.OP1/1 2.51 LYS43:A.NZ/1
DA313:B.OP1/1 2.74 LYS236:A.NZ/1
DA314:B.OP1/1 3.04 ASP21:A.OD1/1
DA314:B.OP2/1 2.92 LYS43:A.N/1
DA314:B.N7/1 2.68 THR76:A.OG1/1
DA314:B.N6/1 2.7 THR76:A.OG1/1
DG315:B.OP2/1 3.07 ASP117:A.OD1/1
DG315:B.O5'/1 2.88 GLY20:A.O/1
DG315:B.N7/1 3.01 ARG77:A.NE/1
DG315:B.O6/1 3.23 ARG77:A.NE/1
DT316:B.OP2/1 2.6 TYR25:A.OH/1
DC318:B.N4/1 3.5 TYR29:A.OH/1
DC318:B.N4/1 3.18 ARG37:A.NH1/1
DG321:B.N7/1 3.21 ARG33:A.NH2/1
DG321:B.O6/1 2.4 ARG33:A.NH2/1
DG402:C.OP1/1 2.82 LYS85:A.NZ/1
DG402:C.OP2/1 2.6 SER34:A.OG/1
DG402:C.OP2/1 3.03 TYR36:A.OH/1
DG402:C.N7/1 3.12 SER34:A.N/1
DC403:C.OP2/1 2.89 LYS85:A.N/1
DC403:C.N4/1 3.12 SER34:A.O/1
DC404:C.OP2/1 3.14 LYS68:A.N/1
DC404:C.N4/1 3.07 GLU35:A.OE1/1
DG405:C.O6/1 2.89 ARG37:A.NH2/1
DG406:C.N7/1 3.14 ARG81:A.NH1/1
DG406:C.N7/1 3.33 ARG81:A.NH2/1
DG406:C.O6/1 2.79 ARG37:A.NH2/1
DA407:C.N6/1 3.19 ARG81:A.NH2/1
DC409:C.N4/1 3.2 ASP75:A.OD2/1
DA413:C.OP1/1 2.73 ASP117:A.OD2/1
DA413:C.OP2/1 2.79 LYS145:A.N/1
DG414:C.OP2/1 2.82 ASP21:A.OD2/1
DG414:C.OP2/1 2.95 GLY116:A.O/1
DG414:C.O5'/1 2.96 GLY116:A.O/1
DG414:C.N7/1 3.03 ARG167:A.NH2/1
DG414:C.O6/1 2.66 ARG167:A.NH1/1
DA415:C.OP1/1 3.04 ASP234:A.N/1
DA415:C.OP2/1 2.65 SER119:A.OG/1
DA415:C.OP2/1 3.1 LYS195:A.NZ/1
DA415:C.N7/1 3.04 GLN141:A.NE2/1
DC416:C.OP1/1 2.75 SER235:A.OG/1
DC416:C.OP2/1 3.07 ASN233:A.ND2/1
DA417:C.OP1/1 2.78 LYS239:A.N/1
DA417:C.OP1/1 3.07 THR240:A.N/1
DA417:C.OP2/1 2.93 GLN123:A.NE2/1
DA417:C.N7/1 2.86 GLN123:A.NE2/1
DG418:C.O6/1 2.87 LYS125:A.NZ/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC302:B.OP1/1 2.9 2020:A/1 2.67 LYS213:A.O/1
DC302:B.OP2/1 2.81 2006:B/1 2.96 PHE132:A.N/1
DA303:B.OP2/1 2.95 2012:A/1 2.66 GLN135:A.NE2/1
DA303:B.OP2/1 3.02 2018:A/1 2.94 LEU136:A.N/1
DA303:B.OP2/1 2.95 2012:A/1 2.93 LEU136:A.O/1
DA304:B.OP2/1 2.89 2110:B/1 2.91 SER176:A.O/1
DA304:B.O5'/1 3.07 2110:B/1 2.91 SER176:A.O/1
DA305:B.OP2/1 2.65 2064:B/1 3.02 TYR163:A.OH/1
DA305:B.OP2/1 2.73 2080:A/1 2.67 SER176:A.N/1
DA305:B.OP2/1 2.73 2080:A/1 3.31 GLU177:A.N/1
DA305:B.N6/1 2.91 2025:A/1 2.87 LYS125:A.NZ/1
DA305:B.N6/1 2.91 2025:A/1 2.91 GLN135:A.OE1/1
DA313:B.OP2/1 3.09 2176:A/1 2.73 THR76:A.O/1
DA314:B.OP1/1 2.83 2058:A/1 2.87 GLY116:A.O/1
DT317:B.O4/1 2.8 2050:B/1 3.07 ARG37:A.NH1/1
DT317:B.O4/1 2.8 2050:B/1 2.81 GLU79:A.OE1/1
DC319:B.OP2/1 3.08 2125:A/1 3.04 LYS30:A.N/1
DG320:B.N7/1 2.58 2453:B/1 2.59 ARG33:A.NH1/1
DC401:C.O5'/1 2.84 2180:C/1 2.94 ASN32:A.O/1
DC401:C.O5'/1 3.19 2273:A/1 2.69 ASN32:A.ND2/1
DC403:C.OP1/1 2.56 2055:C/1 2.87 LYS86:A.N/1
DC403:C.OP2/1 2.63 2039:C/1 3.11 TYR36:A.N/1
DC403:C.OP2/1 2.63 2039:C/1 2.92 SER83:A.OG/1
DC404:C.OP2/1 2.93 2019:A/1 2.85 GLN70:A.NE2/1
DC404:C.OP2/1 2.93 2019:A/1 2.81 SER83:A.N/1
DG405:C.OP2/1 2.97 2259:A/1 2.7 GLN70:A.OE1/1
DG405:C.N7/1 2.96 2007:A/1 2.71 GLU35:A.OE2/1
DG405:C.N7/1 2.96 2007:A/1 3.39 ARG37:A.NH2/1
DG405:C.N7/1 2.96 2007:A/1 3.06 GLN70:A.NE2/1
DG405:C.N7/1 2.96 2007:A/1 3.06 ARG81:A.NH1/1
DG406:C.OP2/1 3.09 2226:C/1 3.25 LYS73:A.N/1
DA407:C.N7/1 3.28 2267:A/1 2.97 ARG77:A.NH1/1
DT410:C.O4/1 2.48 2457:C/1 3.12 ASP75:A.OD2/1
DA413:C.OP1/1 2.63 2095:C/1 2.84 TRP19:A.O/1
DA413:C.OP1/1 2.63 2095:C/1 3.07 GLY20:A.O/1
DA413:C.OP1/1 2.63 2095:C/1 3.17 ASP117:A.OD2/1
DA413:C.OP2/1 2.71 2252:C/1 2.86 GLN144:A.OE1/1
DA413:C.OP2/1 2.71 2252:C/1 2.83 ARG148:A.NH1/1
DA415:C.OP2/1 2.67 2240:C/1 2.81 ILE120:A.N/1
DA415:C.OP2/1 2.67 2240:C/1 3.14 LYS195:A.NZ/1
DA415:C.OP2/1 2.67 2240:C/1 2.73 ASN233:A.OD1/1
DA415:C.O3'/1 2.99 2068:A/1 3.03 LYS236:A.N/1
DA415:C.O3'/1 2.99 2068:A/1 2.96 THR237:A.N/1
DA415:C.N6/1 3.1 2082:A/1 2.91 GLN141:A.OE1/1
DA415:C.N6/1 3.1 2082:A/1 3.22 ARG165:A.NH2/1
DA415:C.N3/1 2.68 2087:C/1 2.81 THR237:A.OG1/1
DC416:C.OP2/1 2.83 2071:C/1 2.98 ALA122:A.N/1
DC416:C.OP2/1 2.83 2071:C/1 2.91 ALA122:A.O/1
DC416:C.O2/1 2.76 2296:A/1 2.5 THR237:A.OG1/1
DC416:C.N4/1 2.98 2047:C/1 3.07 GLN141:A.OE1/1
DA417:C.OP1/1 2.97 2059:C/1 3.06 ILE124:A.N/1
DA417:C.OP2/1 2.8 2059:C/1 3.06 ILE124:A.N/1
DA417:C.OP2/1 2.82 2049:A/1 2.51 ILE124:A.O/1
DA417:C.OP2/1 2.8 2059:C/1 3.07 THR240:A.O/1
DA417:C.N6/1 3.13 2142:A/1 2.98 GLN123:A.OE1/1
DA417:C.N6/1 3.13 2142:A/1 3.1 LYS125:A.NZ/1
DG418:C.OP2/1 2.88 2290:A/1 2.49 THR240:A.OG1/1
DT419:C.O4/1 2.87 2005:A/1 3.26 ASN127:A.ND2/1
DT419:C.O4/1 2.87 2005:A/1 2.79 GLN135:A.OE1/1
DT421:C.O4/1 2.88 2160:C/1 3.23 ASN127:A.ND2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text