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Nucleic atom dist Protein atom
DC802:E.OP2/1 2.48 LYS631:D.N/1
DA803:E.OP1/1 2.71 LYS713:D.NZ/1
DA803:E.N7/1 2.57 TYR630:D.OH/1
DA803:E.N6/1 3.05 TYR630:D.OH/1
DA804:E.OP2/1 2.81 ILE678:D.N/1
DA804:E.N7/1 3.02 GLN635:D.NE2/1
DA804:E.N6/1 3.24 GLN635:D.OE1/1
DG808:E.N7/1 2.98 ARG665:D.NH1/1
DG808:E.O6/1 2.51 ARG665:D.NH2/1
DT809:E.O4/1 3.29 ARG667:D.NH1/1
DA813:E.OP1/1 2.55 LYS543:D.NZ/1
DA813:E.OP1/1 2.99 LYS736:D.NZ/1
DA814:E.OP1/1 2.84 ASP521:D.OD1/1
DA814:E.OP2/1 3.04 LYS543:D.N/1
DA814:E.N7/1 2.63 THR576:D.OG1/1
DA814:E.N6/1 2.55 THR576:D.OG1/1
DG815:E.OP2/1 3.06 ASP617:D.OD1/1
DG815:E.O5'/1 2.99 GLY520:D.O/1
DG815:E.N7/1 3.06 ARG577:D.NE/1
DG815:E.O6/1 3.2 ARG577:D.NE/1
DT816:E.OP2/1 2.59 TYR525:D.OH/1
DG820:E.OP2/1 3.29 LYS530:D.NZ/1
DG821:E.N7/1 3.22 ARG533:D.NH2/1
DG821:E.O6/1 2.51 ARG533:D.NH2/1
DG902:F.OP1/1 2.7 LYS585:D.NZ/1
DG902:F.OP2/1 2.66 SER534:D.OG/1
DG902:F.OP2/1 2.81 TYR536:D.OH/1
DG902:F.N7/1 3.12 SER534:D.N/1
DC903:F.OP2/1 2.89 LYS585:D.N/1
DC903:F.N4/1 2.97 SER534:D.O/1
DC904:F.OP2/1 3.11 LYS568:D.N/1
DC904:F.N4/1 3.14 GLU535:D.OE1/1
DG905:F.O6/1 2.96 ARG537:D.NH2/1
DG906:F.N7/1 3.1 ARG581:D.NH1/1
DG906:F.N7/1 3.27 ARG581:D.NH2/1
DG906:F.O6/1 2.8 ARG537:D.NH2/1
DA907:F.N6/1 3.23 ARG581:D.NH2/1
DC909:F.N4/1 3.05 ASP575:D.OD1/1
DA913:F.OP1/1 2.74 ASP617:D.OD2/1
DA913:F.OP2/1 2.81 LYS645:D.N/1
DG914:F.OP2/1 2.89 ASP521:D.OD2/1
DG914:F.OP2/1 2.91 GLY616:D.O/1
DG914:F.O5'/1 3 GLY616:D.O/1
DG914:F.N7/1 3.07 ARG667:D.NH2/1
DG914:F.O6/1 2.74 ARG667:D.NH1/1
DA915:F.OP1/1 3.07 ASP734:D.N/1
DA915:F.OP2/1 2.65 SER619:D.OG/1
DA915:F.OP2/1 3.08 LYS695:D.NZ/1
DA915:F.N7/1 3.01 GLN641:D.NE2/1
DC916:F.OP1/1 2.74 SER735:D.OG/1
DC916:F.OP2/1 3.07 ASN733:D.ND2/1
DA917:F.OP1/1 2.69 LYS739:D.N/1
DA917:F.OP1/1 3.01 THR740:D.N/1
DA917:F.OP2/1 2.87 GLN623:D.NE2/1
DA917:F.N7/1 2.97 GLN623:D.NE2/1
DG918:F.O6/1 2.78 LYS625:D.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC802:E.OP1/1 2.87 2246:D/1 2.55 LYS713:D.O/1
DC802:E.OP2/1 2.91 2021:E/1 3.01 PHE632:D.N/1
DA803:E.OP2/1 2.63 2015:E/1 2.99 GLN635:D.NE2/1
DA803:E.OP2/1 2.7 2027:E/1 3.02 LEU636:D.N/1
DA803:E.OP2/1 2.63 2015:E/1 2.75 LEU636:D.O/1
DA804:E.OP1/1 2.55 2061:E/1 2.98 LYS679:D.N/1
DA804:E.OP2/1 2.73 2140:E/1 3.13 SER676:D.O/1
DA805:E.OP2/1 2.88 2035:D/1 2.69 TYR663:D.OH/1
DA805:E.OP2/1 2.91 2109:D/1 2.81 SER676:D.N/1
DA805:E.OP2/1 2.91 2109:D/1 3.15 GLU677:D.N/1
DA805:E.N6/1 2.69 2008:E/1 3 LYS625:D.NZ/1
DA805:E.N6/1 2.69 2008:E/1 3.09 GLN635:D.OE1/1
DT809:E.O2/1 3.01 2101:D/1 2.63 THR737:D.OG1/1
DA813:E.OP2/1 2.58 2149:E/1 2.96 THR576:D.O/1
DA814:E.OP2/1 2.96 2298:E/1 3.1 ASP734:D.OD1/1
DT817:E.O4/1 2.83 2030:D/1 2.94 ARG537:D.NH1/1
DT817:E.O4/1 2.83 2030:D/1 2.67 GLU579:D.OE1/1
DC819:E.OP2/1 2.94 2104:E/1 3.18 LYS530:D.N/1
DG820:E.N7/1 3 2446:D/1 2.81 ARG533:D.NH1/1
DC901:F.O5'/1 3.14 2128:D/1 2.89 ASN532:D.O/1
DC903:F.OP1/1 2.59 2042:F/1 2.84 LYS586:D.N/1
DC903:F.OP2/1 2.56 2002:F/1 3.19 TYR536:D.N/1
DC903:F.OP2/1 2.56 2002:F/1 2.91 SER583:D.OG/1
DC904:F.OP1/1 2.65 2268:F/1 3.21 LYS566:D.O/1
DC904:F.OP2/1 2.67 2013:F/1 2.76 LYS568:D.O/1
DC904:F.OP2/1 2.67 2013:F/1 2.95 GLN570:D.NE2/1
DC904:F.OP2/1 2.67 2013:F/1 2.9 SER583:D.N/1
DG905:F.OP2/1 3.12 2260:D/1 2.6 GLN570:D.OE1/1
DG905:F.N7/1 3.03 2011:D/1 2.75 GLU535:D.OE2/1
DG905:F.N7/1 3.03 2011:D/1 3.31 ARG537:D.NH2/1
DG905:F.N7/1 3.03 2011:D/1 3.22 GLN570:D.NE2/1
DG905:F.N7/1 3.03 2011:D/1 2.94 ARG581:D.NH1/1
DA907:F.N7/1 3.31 2441:D/1 3.14 ARG577:D.NH1/1
DT910:F.O4/1 2.57 2398:F/1 2.81 ASP575:D.OD1/1
DA913:F.OP1/1 2.67 2173:F/1 2.71 TRP519:D.O/1
DA913:F.OP1/1 2.67 2173:F/1 2.89 GLY520:D.O/1
DA913:F.OP1/1 2.67 2173:F/1 3.1 ASP617:D.OD2/1
DA913:F.OP2/1 2.82 2093:D/1 2.8 GLN644:D.OE1/1
DA913:F.OP2/1 2.82 2093:D/1 2.87 ARG648:D.NH2/1
DA915:F.OP2/1 2.56 2277:F/1 2.89 ILE620:D.N/1
DA915:F.OP2/1 2.56 2277:F/1 3.03 LYS695:D.NZ/1
DA915:F.OP2/1 2.56 2277:F/1 2.8 ASN733:D.OD1/1
DA915:F.O3'/1 3.06 2056:D/1 3.11 LYS736:D.N/1
DA915:F.O3'/1 3.06 2056:D/1 2.93 THR737:D.N/1
DA915:F.N6/1 3.16 2091:D/1 2.75 GLN641:D.OE1/1
DA915:F.N6/1 3.16 2091:D/1 3.28 ARG665:D.NH2/1
DA915:F.N3/1 2.74 2291:D/1 2.69 THR737:D.OG1/1
DC916:F.OP2/1 2.92 2074:D/1 2.82 ALA622:D.N/1
DC916:F.OP2/1 2.92 2074:D/1 2.82 ALA622:D.O/1
DC916:F.O2/1 2.93 2101:D/1 2.63 THR737:D.OG1/1
DC916:F.N4/1 3.1 2096:D/1 3.06 GLN641:D.OE1/1
DA917:F.OP1/1 3.01 2077:D/1 3.06 ILE624:D.N/1
DA917:F.OP2/1 2.98 2077:D/1 3.06 ILE624:D.N/1
DA917:F.OP2/1 2.8 2026:D/1 2.63 ILE624:D.O/1
DA917:F.OP2/1 2.98 2077:D/1 2.93 THR740:D.O/1
DA917:F.N6/1 2.98 2083:D/1 2.84 GLN623:D.OE1/1
DA917:F.N6/1 2.98 2083:D/1 3.23 LYS625:D.NZ/1
DG918:F.OP2/1 2.82 2289:D/1 2.41 THR740:D.OG1/1
DT919:F.O4/1 3.15 2014:D/1 3.22 ASN627:D.ND2/1
DT921:F.O4/1 2.73 2103:F/1 3.23 ASN627:D.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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