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Nucleic atom dist Protein atom
U1283:B.O2'/1 2.41 MET515:A.O/1
A1284:B.OP1/1 2.9 SER462:A.N/1
A1284:B.N6/1 3.4 LYS486:A.NZ/1
A1284:B.N3/1 2.85 ASN807:A.ND2/1
G1285:B.OP1/1 3.16 GLY460:A.N/1
G1285:B.O3'/1 2.92 LYS490:A.NZ/1
G1285:B.O2'/1 2.8 GLY683:A.O/1
G1285:B.N2/1 2.66 SER682:A.O/1
C1286:B.OP1/1 2.52 THR457:A.OG1/1
C1286:B.OP1/1 3.05 LYS490:A.NZ/1
C1286:B.O4'/1 3.13 GLY683:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
U1283:B.O2'/1 3.01 1563:B/1 3.29 MET515:A.N/1
A1284:B.OP1/1 2.3 1454:B/1 2.88 SER462:A.N/1
A1284:B.OP1/1 2.3 1454:B/1 2.33 SER462:A.OG/1
A1284:B.OP2/1 2.69 1579:B/1 3.12 ALA488:A.O/1
G1285:B.O2'/1 2.78 1449:B/1 2.88 LEU531:A.O/1
G1285:B.O2'/1 2.78 1449:B/1 3.05 GLN536:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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