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Nucleic atom dist Protein atom
G1274:B.O3'/1 3.15 ASN827:A.ND2/1
G1275:B.O3'/1 3.41 LYS566:A.NZ/1
G1275:B.O2'/1 2.58 ALA562:A.N/1
G1275:B.N2/1 3.26 SER561:A.N/1
G1276:B.O4'/1 2.66 SER561:A.OG/1
A1284:C.OP1/1 2.87 SER462:A.N/1
A1284:C.N6/1 3.31 LYS486:A.NZ/1
A1284:C.N3/1 2.95 ASN807:A.ND2/1
G1285:C.OP1/1 2.98 GLY460:A.N/1
G1285:C.O3'/1 2.89 LYS490:A.NZ/1
G1285:C.O2'/1 2.76 GLY683:A.O/1
G1285:C.O6/1 2.99 ARG518:A.NH1/1
G1285:C.N2/1 3.26 SER682:A.O/1
C1286:C.OP1/1 2.69 THR457:A.OG1/1
C1286:C.O4'/1 3.01 GLY683:A.O/1
C1287:C.OP1/1 2.95 GLN454:A.NE2/1
C1289:C.O2'/1 2.7 ASP1182:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
G1274:B.OP1/1 2.86 1632:B/1 2.88 LYS803:A.NZ/1
G1274:B.OP2/1 2.76 1632:B/1 2.88 LYS803:A.NZ/1
G1275:B.OP1/1 3.04 1444:A/1 2.94 PRO799:A.O/1
G1275:B.O3'/1 2.88 1469:B/1 2.9 HIS798:A.NE2/1
G1276:B.OP1/1 2.92 1469:B/1 2.9 HIS798:A.NE2/1
G1285:C.O2'/1 2.81 1336:C/1 2.82 LEU531:A.O/1
G1285:C.O2'/1 2.81 1336:C/1 3.14 GLN536:A.OE1/1
C1286:C.O2'/1 3.14 1541:A/1 3.05 SER688:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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