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Nucleic atom dist Protein atom
DT3:B.OP1/1 3 GLN287:A.NE2/1
DC8:B.O4'/1 3.17 TYR203:A.N/1
DC8:B.O2/1 2.51 ARG154:A.NH2/1
DC8:B.O2/1 2.75 ARG204:A.NH1/1
DC8:B.N3/1 3.09 ARG204:A.NH2/1
DC8:B.N4/1 3.16 ASN149:A.OD1/1
DA22:C.N3/1 3.27 ASN151:A.OD1/1
DG24:C.OP1/1 3.34 ASN268:A.ND2/1
DG24:C.OP2/1 3.35 ASN150:A.N/1
DG24:C.O5'/1 3.26 ASN149:A.N/1
DG24:C.O4'/1 3.15 ASN149:A.N/1
DT25:C.OP1/1 2.93 GLY247:A.N/1
DT25:C.OP1/1 2.73 VAL250:A.N/1
DC26:C.OP1/1 2.79 GLY245:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT9:B.OP1/1 3.05 441:A/1 2.65 ARG197:A.O/1
DT9:B.OP1/1 3.05 441:A/1 2.97 GLY202:A.N/1
DA22:C.N7/1 3.38 341:A/1 3.07 ASN149:A.ND2/1
DA22:C.N6/1 3.19 341:A/1 3.07 ASN149:A.ND2/1
DG24:C.OP1/1 2.65 1005:C/1 3.41 VAL269:A.N/1
DC26:C.OP1/1 2.83 404:A/1 2.85 LEU243:A.O/1
DC26:C.OP1/1 2.83 404:A/1 2.64 VAL246:A.O/1
DC26:C.OP2/1 2.97 396:A/1 2.96 CYS241:A.O/1
DC26:C.OP2/1 2.83 404:A/1 2.85 LEU243:A.O/1
DC26:C.OP2/1 2.83 404:A/1 2.64 VAL246:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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