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Nucleic atom dist Protein atom
DT1:C.O5'/1 2.58 PRO62:B.O/1
DG2:C.N7/1 2.95 ARG56:B.NH1/1
DG2:C.O6/1 2.83 ARG56:B.NH2/1
DG3:C.N7/1 3.45 ARG54:B.NH1/1
DG3:C.O6/1 2.69 ARG54:B.NH2/1
DA5:C.OP2/1 2.74 ARG305:A.NH1/1
DA6:C.OP2/1 2.99 GLN306:A.NE2/1
DT8:C.OP1/1 2.81 LYS144:A.N/1
DT8:C.OP2/1 2.84 TYR57:A.OH/1
DT8:C.O4/1 2.92 LYS241:A.NZ/1
DC10:C.N4/1 3.2 GLU60:A.OE1/1
DC11:C.N4/1 3.3 GLU60:A.O/1
DG2:D.N7/1 3.27 ARG56:A.NH2/1
DG2:D.O6/1 2.64 ARG56:A.NH1/1
DG3:D.N7/1 3.18 ARG54:A.NH1/1
DG3:D.O6/1 3.02 ARG54:A.NH2/1
DG4:D.OP2/1 2.44 ARG305:B.NH1/1
DG4:D.O5'/1 2.51 ARG305:B.NH1/1
DA5:D.OP1/1 2.8 LYS275:B.NZ/1
DA6:D.OP2/1 3.25 GLN306:B.NE2/1
DT7:D.OP1/1 3.24 LYS144:B.NZ/1
DT8:D.OP1/1 2.82 LYS144:B.N/1
DT8:D.OP2/1 2.94 TYR57:B.OH/1
DC10:D.N4/1 2.93 GLU60:B.OE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG3:C.N7/1 2.54 16:C/1 2.89 LYS241:B.NZ/1
DA5:C.OP1/1 2.94 26:C/1 3.15 LYS275:A.N/1
DA5:C.OP1/1 2.64 14:C/1 2.96 GLN306:A.N/1
DA5:C.OP1/1 2.94 26:C/1 3.2 GLN306:A.NE2/1
DT8:C.OP1/1 2.87 28:C/1 3.38 LYS145:A.N/1
DC9:C.N4/1 3.16 443:A/1 2.69 GLU60:A.OE2/1
DC10:C.OP2/1 3.11 447:A/1 2.77 CYS59:A.O/1
DA5:D.OP1/1 3.19 367:B/1 2.59 GLN306:B.NE2/1
DA6:D.N7/1 3.21 376:B/1 3.03 LYS272:B.NZ/1
DT8:D.OP2/1 3.1 405:B/1 3.03 HIS141:B.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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