Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC108:F.OP1/1 3.13 ARG239:B.N/1
DC108:F.N4/1 2.95 GLU910:A.OE1/1
DA109:F.OP2/1 3.23 ARG239:B.NH2/1
DC110:F.OP2/1 2.76 ARG215:B.NH2/1
DC110:F.O5'/1 2.85 ARG215:B.NH2/1
DG111:F.OP2/1 2.86 ARG212:B.NH1/1
DT112:F.OP2/1 2.74 ASN208:B.ND2/1
DG113:F.N7/1 3.24 HIS207:B.NE2/1
DG113:F.O6/1 2.79 HIS207:B.NE2/1
DT305:G.OP2/1 2.77 HIS206:B.NE2/1
DC308:G.N4/1 3.2 GLU211:B.OE1/1
DA309:G.OP1/1 3.37 LYS918:A.NZ/1
DC310:G.OP2/1 3.22 ARG914:A.NH1/1
DG311:G.N7/1 2.33 ARG914:A.NH2/1
DT312:G.OP2/1 2.81 ARG903:A.NH1/1
DT312:G.OP2/1 2.65 ASN907:A.OD1/1
DG313:G.O6/1 3.05 HIS906:A.NE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG107:F.N7/1 2.96 21:A/1 2.65 GLU910:A.OE1/1
DC108:F.OP2/1 2.77 121:F/1 2.77 ARG913:A.NH1/1
DC108:F.OP2/1 2.69 124:F/1 3.2 ARG239:B.N/1
DC108:F.OP2/1 2.69 124:F/1 2.96 ALA240:B.N/1
DA109:F.OP2/1 3.27 293:B/1 2.7 ARG215:B.O/1
DA109:F.N6/1 3.33 60:A/1 2.61 GLU910:A.OE2/1
DA109:F.N6/1 3.33 60:A/1 2.82 ARG914:A.NE/1
DC110:F.OP2/1 2.87 337:B/1 2.65 ARG212:B.O/1
DG111:F.OP1/1 2.99 129:F/1 3.25 ASN208:B.ND2/1
DG111:F.OP2/1 2.73 123:F/1 2.83 ASN208:B.O/1
DG111:F.O6/1 2.83 289:B/1 2.56 GLU211:B.OE2/1
DG111:F.O6/1 2.83 289:B/1 2.96 ARG215:B.NH1/1
DT112:F.OP2/1 3.15 287:B/1 2.71 ASN208:B.OD1/1
DT112:F.O5'/1 3.04 287:B/1 2.71 ASN208:B.OD1/1
DA306:G.OP2/1 2.84 290:B/1 2.77 LEU210:B.O/1
DA306:G.N7/1 2.86 325:G/1 3.07 HIS207:B.ND1/1
DG307:G.OP2/1 2.79 300:B/1 2.75 ARG214:B.NH1/1
DG307:G.N7/1 2.64 326:G/1 2.71 GLU211:B.OE1/1
DC308:G.OP1/1 2.78 86:A/1 2.6 LYS936:A.O/1
DC308:G.OP1/1 2.79 327:G/1 2.82 LYS939:A.NZ/1
DC308:G.OP2/1 2.69 334:G/1 3.05 LYS939:A.NZ/1
DC308:G.OP2/1 2.87 24:A/1 2.85 VAL940:A.N/1
DC308:G.O5'/1 2.76 334:G/1 3.05 LYS939:A.NZ/1
DA309:G.N6/1 3.32 289:B/1 2.56 GLU211:B.OE2/1
DA309:G.N6/1 3.32 289:B/1 2.96 ARG215:B.NH1/1
DC310:G.OP2/1 2.84 332:G/1 3.18 ASN915:A.OD1/1
DG311:G.OP2/1 2.63 322:G/1 2.83 ASN907:A.O/1
DG311:G.OP2/1 2.63 322:G/1 3.1 ARG914:A.NH1/1
DG311:G.OP2/1 2.63 322:G/1 3.12 ARG914:A.NH2/1
DG311:G.O6/1 2.63 60:A/1 2.61 GLU910:A.OE2/1
DG311:G.O6/1 2.63 60:A/1 2.82 ARG914:A.NE/1
DG311:G.O6/1 2.63 60:A/1 3.11 ARG914:A.NH2/1
DT312:G.O5'/1 3.04 40:A/1 2.56 ASN907:A.ND2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text