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Nucleic atom dist Protein atom
DC608:H.OP1/1 3.26 LYS539:D.N/1
DC608:H.OP2/1 3.37 LYS539:D.N/1
DC608:H.N4/1 3.13 GLU711:E.OE1/1
DA609:H.OP2/1 2.87 LYS539:D.NZ/1
DC610:H.OP2/1 2.83 ARG514:D.NE/1
DC610:H.O5'/1 3.29 ARG514:D.NH2/1
DG611:H.N7/1 3.12 ARG514:D.NH1/1
DT612:H.OP2/1 2.71 ARG503:D.NH1/1
DT612:H.OP2/1 2.74 ASN507:D.OD1/1
DG613:H.O6/1 3.01 HIS506:D.NE2/1
DC808:J.OP1/1 2.94 ARG739:E.N/1
DC808:J.OP2/1 3.22 ARG513:D.NH2/1
DC808:J.N4/1 3.1 GLU510:D.OE1/1
DG811:J.OP2/1 2.93 ARG712:E.NH2/1
DG811:J.N7/1 2.52 ARG715:E.NH2/1
DT812:J.OP2/1 2.75 ASN708:E.OD1/1
DG813:J.OP2/1 2.92 ARG704:E.NE/1
DG813:J.N7/1 3.25 HIS707:E.NE2/1
DG813:J.O6/1 2.77 HIS707:E.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA606:H.OP2/1 3 48:E/1 2.79 LEU710:E.O/1
DG607:H.OP2/1 2.82 35:E/1 2.55 ARG714:E.NE/1
DG607:H.N7/1 2.79 166:E/1 2.66 GLU711:E.OE1/1
DC608:H.OP1/1 2.91 89:H/1 3.06 LYS539:D.NZ/1
DC608:H.OP2/1 2.59 23:H/1 2.91 VAL540:D.N/1
DA609:H.N6/1 3.32 115:E/1 2.72 GLU711:E.OE2/1
DA609:H.N6/1 3.32 115:E/1 2.54 ARG715:E.NE/1
DC610:H.OP1/1 2.44 200:H/1 3.07 ASN515:D.OD1/1
DG611:H.OP2/1 2.58 4:H/1 2.64 ASN507:D.O/1
DG611:H.OP2/1 2.86 630:D/1 2.84 ARG511:D.NE/1
DG611:H.OP2/1 2.58 4:H/1 2.81 ARG514:D.NH2/1
DG611:H.O6/1 2.5 109:H/1 2.86 GLU510:D.OE2/1
DG611:H.O6/1 2.5 109:H/1 2.68 ARG514:D.NH1/1
DT612:H.OP2/1 3.24 589:D/1 2.7 ASN507:D.ND2/1
DT612:H.O5'/1 3.14 589:D/1 2.7 ASN507:D.ND2/1
DC808:J.OP2/1 2.89 257:J/1 3.13 ARG739:E.N/1
DC808:J.OP2/1 2.89 257:J/1 2.89 ALA740:E.N/1
DA809:J.N7/1 2.68 513:J/1 3.08 ARG513:D.NH1/1
DA809:J.N6/1 3.35 109:H/1 2.86 GLU510:D.OE2/1
DC810:J.OP2/1 2.74 507:E/1 2.66 ARG712:E.O/1
DG811:J.OP2/1 2.66 59:E/1 2.95 ASN708:E.O/1
DG811:J.OP2/1 2.66 59:E/1 2.57 ARG715:E.NH2/1
DG811:J.O6/1 2.63 115:E/1 2.72 GLU711:E.OE2/1
DG811:J.O6/1 2.63 115:E/1 2.54 ARG715:E.NE/1
DT812:J.O5'/1 3.02 26:E/1 2.76 ASN708:E.ND2/1
DG813:J.OP1/1 2.82 518:E/1 2.68 ARG704:E.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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