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Nucleic atom dist Protein atom
G8:C.OP1/1 3.12 LYS144:A.NZ/1
G8:C.O6/1 2.79 LYS241:A.O/1
G8:C.O6/1 3.05 ALA242:A.O/1
A9:C.OP1/1 2.9 LYS144:A.N/1
A9:C.OP2/1 2.44 TYR57:A.OH/1
A11:C.N6/1 3.32 GLU60:A.OE1/1
C12:C.N4/1 2.76 GLU60:A.O/1
G14:C.N2/1 3.03 PRO62:A.O/1
G14:C.N2/1 2.91 SER63:A.O/1
A17:C.OP1/1 2.38 LYS77:A.NZ/1
G18:C.N7/1 3.12 HIS64:A.ND1/1
G18:C.O6/1 3.12 HIS64:A.ND1/1
G19:C.N7/1 3.2 ARG56:A.NH2/1
G19:C.O6/1 3.04 ARG56:A.NH1/1
U20:C.O4/1 3.25 ARG54:A.NH2/1
U21:C.OP2/1 2.84 LYS249:A.NZ/1
G22:C.O6/1 2.98 LYS241:A.NZ/1
C24:C.O3'/1 3.16 LYS145:A.NZ/1
C24:C.O2/1 2.88 LYS144:A.NZ/1
G25:C.OP1/1 3.4 LYS145:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
A10:C.OP2/1 2.59 492:C/1 2.9 CYS59:A.N/1
A10:C.N6/1 2.91 557:A/1 2.72 GLU60:A.OE2/1
C12:C.OP2/1 2.8 624:A/1 2.65 CYS59:A.O/1
G18:C.OP1/1 2.7 465:C/1 2.84 GLY66:A.O/1
G19:C.OP2/1 2.75 625:C/1 2.79 ARG56:A.NH2/1
G22:C.OP2/1 2.72 467:C/1 2.76 LYS249:A.NZ/1
G22:C.N2/1 2.98 557:A/1 2.72 GLU60:A.OE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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