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Nucleic atom dist Protein atom
G8:D.OP1/1 2.6 LYS144:B.NZ/1
G8:D.O6/1 2.78 LYS241:B.O/1
G8:D.O6/1 2.71 ALA242:B.O/1
A9:D.OP1/1 2.81 LYS144:B.N/1
A9:D.OP2/1 2.78 TYR57:B.OH/1
A11:D.N6/1 2.76 GLU60:B.OE1/1
C12:D.N4/1 3.03 GLU60:B.O/1
U15:D.N3/1 2.48 SER63:B.O/1
U15:D.O4/1 2.6 PRO62:B.O/1
G18:D.N7/1 3.08 HIS64:B.ND1/1
G18:D.O6/1 3 HIS64:B.ND1/1
G19:D.N7/1 3.2 ARG56:B.NH2/1
G19:D.O6/1 3.27 ARG56:B.NH1/1
U20:D.O4/1 2.86 ARG54:B.NH1/1
U20:D.O4/1 2.8 ARG54:B.NH2/1
G25:D.OP1/1 3.25 LYS145:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
A16:D.O2'/1 2.55 527:D/1 3.34 LYS77:B.NZ/1
A17:D.O5'/1 2.61 527:D/1 3.34 LYS77:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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