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Nucleic atom dist Protein atom
DT4:A.OP1/1 3.13 ARG10:R.NH2/1
DT4:A.OP2/1 3.01 GLN17:R.N/1
DA5:A.OP2/1 3.03 GLN17:R.NE2/1
DA5:A.OP2/1 3.18 ASN36:R.ND2/1
DA5:A.N7/1 3.15 GLN28:R.OE1/1
DA5:A.N6/1 2.7 GLN28:R.OE1/1
DT12:A.OP1/1 3.36 LYS40:L.NZ/1
DT13:A.OP1/1 2.95 ARG41:L.N/1
DT13:A.OP1/1 2.75 ARG43:R.NH2/1
DT13:A.OP2/1 3.4 LYS40:L.N/1
DC14:A.OP1/1 2.47 ARG43:L.N/1
DT15:A.O4/1 2.82 GLN33:L.NE2/1
DG17:A.N7/1 3.23 GLN29:L.NE2/1
DG17:A.O6/1 2.37 GLN29:L.NE2/1
DT18:A.O4/1 3.31 GLN29:L.NE2/1
DT3:B.OP2/1 3.06 GLN17:L.N/1
DA4:B.OP2/1 2.85 GLN17:L.NE2/1
DA4:B.O5'/1 3.19 ASN36:L.ND2/1
DA4:B.N7/1 3.24 GLN28:L.NE2/1
DA12:B.OP1/1 3.06 LYS40:R.N/1
DA12:B.OP1/1 2.76 ARG41:R.N/1
DA12:B.OP2/1 3.13 LYS40:R.N/1
DA13:B.OP1/1 2.89 ARG43:R.N/1
DC14:B.OP2/1 2.72 THR27:R.OG1/1
DC14:B.OP2/1 2.65 SER30:R.OG/1
DG16:B.O6/1 2.52 GLN29:R.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC14:A.OP2/1 2.86 70:L/1 3.14 SER30:L.OG/1
DT15:A.OP2/1 2.43 25:A/1 2.78 THR26:L.OG1/1
DT15:A.OP2/1 2.57 24:A/1 2.65 THR27:L.OG1/1
DT15:A.OP2/1 2.57 24:A/1 2.99 SER30:L.OG/1
DA4:B.OP2/1 2.88 76:L/1 2.21 LYS7:L.NZ/1
DA4:B.OP2/1 2.88 76:L/1 2.57 GLN17:L.NE2/1
DA4:B.OP2/1 2.88 76:L/1 2.5 GLU35:L.OE1/1
DA6:B.N7/1 2.98 22:B/1 3.16 GLN33:L.NE2/1
DA6:B.N7/1 2.98 22:B/1 3.09 LYS38:L.NZ/1
DA11:B.N3/1 2.46 22:A/1 2.64 ARG43:L.NH2/1
DA13:B.OP2/1 2.29 70:R/1 2.26 THR39:R.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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