Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT2:C.O2/1 2.81 LYS244:B.NZ/1
DA4:C.OP1/1 2.71 ARG154:B.NH2/1
DC5:C.OP1/1 2.66 ARG159:B.NH1/1
DC5:C.OP1/1 3.2 VAL242:B.N/1
DC5:C.OP2/1 3.17 GLN156:B.NE2/1
DC5:C.OP2/1 2.83 ARG159:B.NH2/1
DT6:C.OP2/1 2.68 SER257:B.N/1
DC7:C.N4/1 3.16 SER259:B.OG/1
DT10:C.OP1/1 2.65 ARG50:B.NH1/1
DT10:C.OP2/1 2.45 SER47:B.OG/1
DT10:C.OP2/1 3.17 ARG50:B.NH2/1
DA11:C.OP1/1 2.3 ARG81:B.NH2/1
DA11:C.N3/1 3 ARG282:B.NH2/1
DT12:C.OP2/1 2.76 ALA84:B.N/1
DA13:C.OP1/1 2.97 LYS132:B.N/1
DA14:C.OP1/1 2.54 TYR324:B.OH/1
DA14:C.N7/1 2.57 LYS86:B.NZ/1
DA14:C.N3/1 2.64 LYS201:B.NZ/1
DT15:C.OP1/1 3.17 ARG173:B.NE/1
DT15:C.OP1/1 3.37 ARG173:B.NH2/1
DT15:C.OP2/1 3.1 TRP315:B.NE1/1
DT15:C.O4'/1 3.22 LYS201:B.NZ/1
DG16:C.OP1/1 2.63 THR316:B.N/1
DG16:C.OP2/1 3.03 ASN317:B.N/1
DG16:C.OP2/1 3.09 ASN317:B.OD1/1
DC21:C.OP1/1 3.35 ARG100:A.NH1/2
DT22:C.OP1/1 2.25 LYS122:B.NZ/2
DT22:C.OP2/1 2.97 SER38:A.N/2
DT22:C.OP2/1 2.4 THR41:A.OG1/2
DT22:C.O4/1 2.71 GLN90:A.NE2/2
DA23:C.OP2/1 2.73 HIS40:A.ND1/2
DA23:C.O3'/1 3.06 ARG173:A.NH2/2
DT24:C.OP1/1 2.39 ARG173:A.NH2/2
DA25:C.OP1/1 2.72 SER287:A.OG/2
DA25:C.OP1/1 3.1 HIS289:A.N/2
DA25:C.OP2/1 3.39 GLY288:A.N/2
DA25:C.O4'/1 2.99 ARG282:A.NH1/2
DA25:C.N3/1 3.46 ARG282:A.NH2/2
DT26:C.OP1/1 2.33 TYR283:A.N/2
DT26:C.OP2/1 3.05 HIS262:A.NE2/2
DA27:C.OP1/1 2.73 LYS276:A.NZ/2
DA27:C.OP1/1 2.87 GLN281:A.NE2/2
DT34:C.O2/1 2.4 LYS244:A.NZ/2
DT2:D.O2/1 2.39 LYS244:A.NZ/1
DC5:D.OP1/1 2.82 ARG159:A.NH1/1
DC5:D.OP1/1 2.77 VAL242:A.N/1
DT6:D.OP2/1 3.04 SER257:A.N/1
DT6:D.OP2/1 2.44 SER257:A.OG/1
DC7:D.N4/1 3.01 SER259:A.OG/1
DT10:D.OP2/1 2.81 SER47:A.OG/1
DT10:D.OP2/1 2.64 ARG50:A.NH2/1
DA11:D.OP1/1 2.62 ARG81:A.NH2/1
DA11:D.OP2/1 3.38 ARG81:A.NH1/1
DA11:D.N3/1 2.47 ARG282:A.NH2/1
DT12:D.OP2/1 2.81 ALA84:A.N/1
DT12:D.OP2/1 3.22 THR87:A.OG1/1
DT12:D.O4/1 3.23 GLN90:A.NE2/1
DA13:D.OP1/1 2.73 LYS132:A.N/1
DA16:D.O5'/1 2.83 LYS201:A.NZ/1
DT17:D.O3'/1 3.03 ARG121:B.NE/1
DT17:D.O3'/1 3.14 ARG121:B.NH2/1
DA18:D.OP1/1 3.05 ARG121:B.NE/1
DA18:D.OP1/1 3.08 ARG121:B.NH2/1
DA18:D.OP2/1 3.13 ARG121:B.NE/1
DA20:D.OP2/1 3.28 ARG106:B.NH1/1
DT21:D.OP2/1 3.19 ARG101:B.NE/1
DT22:D.OP1/1 2.64 ARG118:A.NH2/2
DT22:D.OP2/1 3.01 SER38:B.N/1
DT22:D.OP2/1 2.55 THR41:B.OG1/1
DT22:D.O4/1 2.85 GLN90:B.OE1/1
DT24:D.OP1/1 2.81 ALA175:B.N/1
DT24:D.O4/1 3.03 LYS43:B.NZ/1
DA25:D.OP1/1 2.78 SER287:B.OG/1
DA25:D.OP1/1 3.26 HIS289:B.N/1
DA25:D.O4'/1 3.05 ARG282:B.NH1/1
DT26:D.OP1/1 2.59 TYR283:B.N/1
DT26:D.OP2/1 2.77 HIS262:B.NE2/1
DT2:C.O2/2 2.81 LYS244:B.NZ/2
DA4:C.OP1/2 2.71 ARG154:B.NH2/2
DC5:C.OP1/2 2.66 ARG159:B.NH1/2
DC5:C.OP1/2 3.2 VAL242:B.N/2
DC5:C.OP2/2 3.17 GLN156:B.NE2/2
DC5:C.OP2/2 2.83 ARG159:B.NH2/2
DT6:C.OP2/2 2.68 SER257:B.N/2
DC7:C.N4/2 3.16 SER259:B.OG/2
DT10:C.OP1/2 2.65 ARG50:B.NH1/2
DT10:C.OP2/2 2.45 SER47:B.OG/2
DT10:C.OP2/2 3.17 ARG50:B.NH2/2
DA11:C.OP1/2 2.3 ARG81:B.NH2/2
DA11:C.N3/2 3 ARG282:B.NH2/2
DT12:C.OP2/2 2.76 ALA84:B.N/2
DA13:C.OP1/2 2.97 LYS132:B.N/2
DA14:C.OP1/2 2.54 TYR324:B.OH/2
DA14:C.N7/2 2.57 LYS86:B.NZ/2
DA14:C.N3/2 2.64 LYS201:B.NZ/2
DT15:C.OP1/2 3.17 ARG173:B.NE/2
DT15:C.OP1/2 3.37 ARG173:B.NH2/2
DT15:C.OP2/2 3.1 TRP315:B.NE1/2
DT15:C.O4'/2 3.22 LYS201:B.NZ/2
DG16:C.OP1/2 2.63 THR316:B.N/2
DG16:C.OP2/2 3.03 ASN317:B.N/2
DG16:C.OP2/2 3.09 ASN317:B.OD1/2
DC21:C.OP1/2 3.35 ARG100:A.NH1/1
DT22:C.OP1/2 2.25 LYS122:B.NZ/1
DT22:C.OP2/2 2.97 SER38:A.N/1
DT22:C.OP2/2 2.4 THR41:A.OG1/1
DT22:C.O4/2 2.71 GLN90:A.NE2/1
DA23:C.OP2/2 2.73 HIS40:A.ND1/1
DA23:C.O3'/2 3.06 ARG173:A.NH2/1
DT24:C.OP1/2 2.39 ARG173:A.NH2/1
DA25:C.OP1/2 2.72 SER287:A.OG/1
DA25:C.OP1/2 3.1 HIS289:A.N/1
DA25:C.OP2/2 3.39 GLY288:A.N/1
DA25:C.O4'/2 2.99 ARG282:A.NH1/1
DA25:C.N3/2 3.46 ARG282:A.NH2/1
DT26:C.OP1/2 2.33 TYR283:A.N/1
DT26:C.OP2/2 3.05 HIS262:A.NE2/1
DA27:C.OP1/2 2.73 LYS276:A.NZ/1
DA27:C.OP1/2 2.87 GLN281:A.NE2/1
DT34:C.O2/2 2.4 LYS244:A.NZ/1
DT2:D.O2/2 2.39 LYS244:A.NZ/2
DC5:D.OP1/2 2.82 ARG159:A.NH1/2
DC5:D.OP1/2 2.77 VAL242:A.N/2
DT6:D.OP2/2 3.04 SER257:A.N/2
DT6:D.OP2/2 2.44 SER257:A.OG/2
DC7:D.N4/2 3.01 SER259:A.OG/2
DT10:D.OP2/2 2.81 SER47:A.OG/2
DT10:D.OP2/2 2.64 ARG50:A.NH2/2
DA11:D.OP1/2 2.62 ARG81:A.NH2/2
DA11:D.OP2/2 3.38 ARG81:A.NH1/2
DA11:D.N3/2 2.47 ARG282:A.NH2/2
DT12:D.OP2/2 2.81 ALA84:A.N/2
DT12:D.OP2/2 3.22 THR87:A.OG1/2
DT12:D.O4/2 3.23 GLN90:A.NE2/2
DA13:D.OP1/2 2.73 LYS132:A.N/2
DA16:D.O5'/2 2.83 LYS201:A.NZ/2
DT17:D.O3'/2 3.03 ARG121:B.NE/2
DT17:D.O3'/2 3.14 ARG121:B.NH2/2
DA18:D.OP1/2 3.05 ARG121:B.NE/2
DA18:D.OP1/2 3.08 ARG121:B.NH2/2
DA18:D.OP2/2 3.13 ARG121:B.NE/2
DA20:D.OP2/2 3.28 ARG106:B.NH1/2
DT21:D.OP2/2 3.19 ARG101:B.NE/2
DT22:D.OP1/2 2.64 ARG118:A.NH2/1
DT22:D.OP2/2 3.01 SER38:B.N/2
DT22:D.OP2/2 2.55 THR41:B.OG1/2
DT22:D.O4/2 2.85 GLN90:B.OE1/2
DT24:D.OP1/2 2.81 ALA175:B.N/2
DT24:D.O4/2 3.03 LYS43:B.NZ/2
DA25:D.OP1/2 2.78 SER287:B.OG/2
DA25:D.OP1/2 3.26 HIS289:B.N/2
DA25:D.O4'/2 3.05 ARG282:B.NH1/2
DT26:D.OP1/2 2.59 TYR283:B.N/2
DT26:D.OP2/2 2.77 HIS262:B.NE2/2
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA3:C.N3/1 2.6 60:C/1 3.21 LYS244:B.N/1
DA4:C.OP2/1 2.58 40:C/1 3.32 GLN156:B.NE2/1
DA4:C.O3'/1 3.13 357:B/1 3.01 ARG241:B.NE/1
DA4:C.N3/1 2.48 38:C/1 2.89 ARG241:B.NH2/1
DT6:C.OP1/1 3.12 377:B/1 3.07 ARG241:B.N/1
DA11:C.OP2/1 2.6 47:C/1 2.98 SER51:B.OG/1
DA11:C.OP2/1 2.68 36:C/1 3 HIS91:B.NE2/1
DA11:C.N7/1 3.27 458:B/1 2.81 SER47:B.OG/1
DA13:C.N7/1 2.7 381:B/1 2.55 LYS86:B.O/1
DA13:C.N6/1 3.04 381:B/1 2.55 LYS86:B.O/1
DA14:C.OP1/1 2.61 53:C/1 2.85 ALA134:B.N/1
DA14:C.OP2/1 2.81 397:B/1 2.64 ALA131:B.O/1
DA14:C.OP2/1 2.81 397:B/1 2.43 LYS132:B.O/1
DC21:C.OP2/1 2.91 356:A/2 2.47 GLY93:A.O/2
DA23:C.N7/1 2.98 55:C/1 3.24 HIS40:A.O/2
DT24:C.OP1/1 2.93 63:C/1 3.14 ALA175:A.N/2
DT24:C.OP2/1 2.87 63:C/1 3.14 ALA175:A.N/2
DA4:D.OP1/1 3 350:A/1 2.26 LYS244:A.O/1
DA4:D.O3'/1 3.03 349:A/1 2.64 ARG241:A.NE/1
DA4:D.O3'/1 3.03 349:A/1 2.68 ARG241:A.NH2/1
DA4:D.N3/1 2.61 45:D/1 3.03 ARG241:A.NH2/1
DA11:D.OP2/1 2.68 41:D/1 3.41 HIS91:A.NE2/1
DG14:D.N2/1 3.44 354:A/1 2.9 LYS201:A.NZ/1
DA18:D.OP2/1 2.97 48:D/1 3.38 GLN89:B.NE2/1
DC19:D.OP1/1 3.12 402:B/1 2.31 SER108:B.OG/1
DC19:D.OP2/1 2.64 402:B/1 2.31 SER108:B.OG/1
DA23:D.N7/1 2.92 355:B/1 2.54 HIS40:B.O/1
DA23:D.N6/1 3 355:B/1 2.54 HIS40:B.O/1
DA25:D.OP1/1 3.02 366:B/1 2.36 TYR283:B.OH/1
DT34:D.OP1/1 2.76 44:D/1 3.03 ASN245:B.OD1/1
DA3:C.N3/2 2.6 60:C/2 3.21 LYS244:B.N/2
DA4:C.OP2/2 2.58 40:C/2 3.32 GLN156:B.NE2/2
DA4:C.O3'/2 3.13 357:B/2 3.01 ARG241:B.NE/2
DA4:C.N3/2 2.48 38:C/2 2.89 ARG241:B.NH2/2
DT6:C.OP1/2 3.12 377:B/2 3.07 ARG241:B.N/2
DA11:C.OP2/2 2.6 47:C/2 2.98 SER51:B.OG/2
DA11:C.OP2/2 2.68 36:C/2 3 HIS91:B.NE2/2
DA11:C.N7/2 3.27 458:B/2 2.81 SER47:B.OG/2
DA13:C.N7/2 2.7 381:B/2 2.55 LYS86:B.O/2
DA13:C.N6/2 3.04 381:B/2 2.55 LYS86:B.O/2
DA14:C.OP1/2 2.61 53:C/2 2.85 ALA134:B.N/2
DA14:C.OP2/2 2.81 397:B/2 2.64 ALA131:B.O/2
DA14:C.OP2/2 2.81 397:B/2 2.43 LYS132:B.O/2
DC21:C.OP2/2 2.91 356:A/1 2.47 GLY93:A.O/1
DA23:C.N7/2 2.98 55:C/2 3.24 HIS40:A.O/1
DT24:C.OP1/2 2.93 63:C/2 3.14 ALA175:A.N/1
DT24:C.OP2/2 2.87 63:C/2 3.14 ALA175:A.N/1
DA4:D.OP1/2 3 350:A/2 2.26 LYS244:A.O/2
DA4:D.O3'/2 3.03 349:A/2 2.64 ARG241:A.NE/2
DA4:D.O3'/2 3.03 349:A/2 2.68 ARG241:A.NH2/2
DA4:D.N3/2 2.61 45:D/2 3.03 ARG241:A.NH2/2
DA11:D.OP2/2 2.68 41:D/2 3.41 HIS91:A.NE2/2
DG14:D.N2/2 3.44 354:A/2 2.9 LYS201:A.NZ/2
DA18:D.OP2/2 2.97 48:D/2 3.38 GLN89:B.NE2/2
DC19:D.OP1/2 3.12 402:B/2 2.31 SER108:B.OG/2
DC19:D.OP2/2 2.64 402:B/2 2.31 SER108:B.OG/2
DA23:D.N7/2 2.92 355:B/2 2.54 HIS40:B.O/2
DA23:D.N6/2 3 355:B/2 2.54 HIS40:B.O/2
DA25:D.OP1/2 3.02 366:B/2 2.36 TYR283:B.OH/2
DT34:D.OP1/2 2.76 44:D/2 3.03 ASN245:B.OD1/2
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text