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Nucleic atom dist Protein atom
DT2:C.O2/1 3.12 LYS244:B.NZ/1
DC5:C.OP1/1 2.42 ARG159:B.NH1/1
DC5:C.OP1/1 3.1 VAL242:B.N/1
DC5:C.OP2/1 3.15 ARG159:B.NH2/1
DT6:C.OP2/1 2.86 SER257:B.N/1
DT10:C.OP1/1 3.46 ARG50:B.NE/1
DT10:C.OP2/1 2.58 SER47:B.OG/1
DT10:C.OP2/1 2.39 ARG50:B.NH2/1
DA11:C.OP1/1 3.2 ARG81:B.NH1/1
DA11:C.OP1/1 2.66 ARG81:B.NH2/1
DA11:C.N3/1 2.49 ARG282:B.NH2/1
DT12:C.OP2/1 2.89 ALA84:B.N/1
DA13:C.OP1/1 2.91 LYS132:B.N/1
DA14:C.N7/1 2.3 LYS86:B.NZ/1
DA14:C.N3/1 2.33 LYS201:B.NZ/1
DT15:C.OP1/1 2.88 ARG173:B.NE/1
DT15:C.OP1/1 3.49 HIS289:B.NE2/1
DT15:C.OP2/1 3.22 ARG292:B.NH2/1
DT15:C.OP2/1 3.15 TRP315:B.NE1/1
DT15:C.O5'/1 3.27 ARG173:B.NH2/1
DT15:C.O4'/1 3.17 LYS201:B.NZ/1
DG16:C.OP1/1 2.29 THR316:B.N/1
DG16:C.OP1/1 3.41 ASN317:B.N/1
DG16:C.OP1/1 2.98 THR316:B.N/1
DG16:C.OP2/1 3.14 ASN317:B.N/1
DG16:C.O5'/1 2.41 THR316:B.OG1/1
DG16:C.O5'/1 2.3 THR316:B.OG1/1
DC21:C.O3'/1 3.31 ARG118:H.NH2/1
DT22:C.OP1/1 2.77 LYS122:H.NZ/1
DT22:C.OP2/1 2.97 SER38:G.N/1
DT22:C.OP2/1 2.36 THR41:G.OG1/1
DT22:C.O4/1 2.86 GLN90:G.NE2/1
DC26:C.OP1/1 2.68 TYR283:G.N/1
DT34:C.O2/1 2.94 LYS244:G.NZ/1
DT2:D.O2/1 2.47 LYS244:A.NZ/1
DC5:D.OP1/1 2.65 ARG159:A.NH1/1
DC5:D.OP1/1 2.53 VAL242:A.N/1
DC5:D.OP1/1 3.23 VAL242:A.O/1
DC5:D.OP2/1 3.29 GLN156:A.NE2/1
DC5:D.OP2/1 3.48 ARG159:A.NH2/1
DT6:D.OP2/1 3.21 SER257:A.N/1
DT10:D.OP2/1 2.87 SER47:A.OG/1
DT10:D.OP2/1 2.42 ARG50:A.NH2/1
DA11:D.OP1/1 2.73 ARG81:A.NH2/1
DA11:D.OP2/1 3.27 ARG81:A.NH1/1
DT12:D.OP2/1 2.72 ALA84:A.N/1
DT12:D.OP2/1 3.08 THR87:A.OG1/1
DT12:D.O4/1 2.92 GLN90:A.NE2/1
DA13:D.OP1/1 2.78 LYS132:A.N/1
DG14:D.OP1/1 2.49 TYR324:A.OH/1
DC15:D.OP1/1 2.42 ARG173:A.NH2/1
DC15:D.OP2/1 2.98 TRP315:A.NE1/1
DA18:D.OP1/1 2.91 ARG121:B.NE/1
DA18:D.OP2/1 2.91 ARG121:B.NH2/1
DA20:D.OP2/1 2.28 ARG106:B.NH1/1
DT21:D.OP1/1 3.1 ARG101:B.NH2/1
DT22:D.OP1/1 3.1 ARG118:G.NH2/1
DT22:D.OP2/1 3.06 SER38:B.N/1
DT22:D.OP2/1 2.41 THR41:B.OG1/1
DT22:D.O4/1 2.7 GLN90:B.OE1/1
DT24:D.OP1/1 3.05 ALA175:B.N/1
DT24:D.O4/1 2.91 LYS43:B.NZ/1
DA25:D.OP1/1 2.6 SER287:B.OG/1
DA25:D.OP1/1 3.21 HIS289:B.N/1
DA25:D.O4'/1 3.28 ARG282:B.NH1/1
DC26:D.OP1/1 2.93 TYR283:B.N/1
DG27:D.OP1/1 3.12 LYS276:B.NZ/1
DG27:D.O6/1 2.5 SER259:B.OG/1
DT32:D.O2/1 2.55 ARG243:B.NH2/1
DT2:E.O2/1 3.12 LYS244:H.NZ/1
DC5:E.OP1/1 2.42 ARG159:H.NH1/1
DC5:E.OP1/1 3.1 VAL242:H.N/1
DC5:E.OP2/1 3.15 ARG159:H.NH2/1
DT6:E.OP2/1 2.86 SER257:H.N/1
DT10:E.OP1/1 3.46 ARG50:H.NE/1
DT10:E.OP2/1 2.58 SER47:H.OG/1
DT10:E.OP2/1 2.39 ARG50:H.NH2/1
DA11:E.OP1/1 3.2 ARG81:H.NH1/1
DA11:E.OP1/1 2.66 ARG81:H.NH2/1
DA11:E.N3/1 2.49 ARG282:H.NH2/1
DT12:E.OP2/1 2.89 ALA84:H.N/1
DA13:E.OP1/1 2.91 LYS132:H.N/1
DA14:E.N7/1 2.3 LYS86:H.NZ/1
DA14:E.N3/1 2.33 LYS201:H.NZ/1
DT15:E.OP1/1 2.88 ARG173:H.NE/1
DT15:E.OP1/1 3.49 HIS289:H.NE2/1
DT15:E.OP2/1 3.22 ARG292:H.NH2/1
DT15:E.OP2/1 3.15 TRP315:H.NE1/1
DT15:E.O5'/1 3.27 ARG173:H.NH2/1
DT15:E.O4'/1 3.17 LYS201:H.NZ/1
DG16:E.OP1/1 2.29 THR316:H.N/1
DG16:E.OP1/1 3.41 ASN317:H.N/1
DG16:E.OP1/1 2.98 THR316:H.N/1
DG16:E.OP2/1 3.14 ASN317:H.N/1
DG16:E.O5'/1 2.41 THR316:H.OG1/1
DG16:E.O5'/1 2.3 THR316:H.OG1/1
DC21:E.O3'/1 3.31 ARG118:B.NH2/1
DT22:E.OP1/1 2.77 LYS122:B.NZ/1
DT22:E.OP2/1 2.97 SER38:A.N/1
DT22:E.OP2/1 2.36 THR41:A.OG1/1
DT22:E.O4/1 2.86 GLN90:A.NE2/1
DC26:E.OP1/1 2.68 TYR283:A.N/1
DT34:E.O2/1 2.94 LYS244:A.NZ/1
DT2:F.O2/1 2.47 LYS244:G.NZ/1
DC5:F.OP1/1 2.65 ARG159:G.NH1/1
DC5:F.OP1/1 2.53 VAL242:G.N/1
DC5:F.OP1/1 3.23 VAL242:G.O/1
DC5:F.OP2/1 3.29 GLN156:G.NE2/1
DC5:F.OP2/1 3.48 ARG159:G.NH2/1
DT6:F.OP2/1 3.21 SER257:G.N/1
DT10:F.OP2/1 2.87 SER47:G.OG/1
DT10:F.OP2/1 2.42 ARG50:G.NH2/1
DA11:F.OP1/1 2.73 ARG81:G.NH2/1
DA11:F.OP2/1 3.27 ARG81:G.NH1/1
DT12:F.OP2/1 2.72 ALA84:G.N/1
DT12:F.OP2/1 3.08 THR87:G.OG1/1
DT12:F.O4/1 2.92 GLN90:G.NE2/1
DA13:F.OP1/1 2.78 LYS132:G.N/1
DG14:F.OP1/1 2.49 TYR324:G.OH/1
DC15:F.OP1/1 2.42 ARG173:G.NH2/1
DC15:F.OP2/1 2.98 TRP315:G.NE1/1
DA18:F.OP1/1 2.91 ARG121:H.NE/1
DA18:F.OP2/1 2.91 ARG121:H.NH2/1
DA20:F.OP2/1 2.28 ARG106:H.NH1/1
DT21:F.OP1/1 3.1 ARG101:H.NH2/1
DT22:F.OP1/1 3.1 ARG118:A.NH2/1
DT22:F.OP2/1 3.06 SER38:H.N/1
DT22:F.OP2/1 2.41 THR41:H.OG1/1
DT22:F.O4/1 2.7 GLN90:H.OE1/1
DT24:F.OP1/1 3.05 ALA175:H.N/1
DT24:F.O4/1 2.91 LYS43:H.NZ/1
DA25:F.OP1/1 2.6 SER287:H.OG/1
DA25:F.OP1/1 3.21 HIS289:H.N/1
DA25:F.O4'/1 3.28 ARG282:H.NH1/1
DC26:F.OP1/1 2.93 TYR283:H.N/1
DG27:F.OP1/1 3.12 LYS276:H.NZ/1
DG27:F.O6/1 2.5 SER259:H.OG/1
DT32:F.O2/1 2.55 ARG243:H.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.OP1/1 2.66 41:C/1 3.09 ARG243:B.O/1
DA4:C.OP1/1 2.81 42:C/1 2.83 LYS244:B.O/1
DA4:C.O3'/1 3.08 351:B/1 2.87 ARG241:B.NE/1
DA4:C.N3/1 2.85 36:C/1 2.98 ARG241:B.NH2/1
DA11:C.OP2/1 2.42 35:C/1 2.79 HIS91:B.NE2/1
DA4:D.O3'/1 2.79 42:D/1 2.91 ARG241:A.NE/1
DA13:D.N6/1 2.43 209:D/1 2.62 GLN90:A.NE2/1
DA25:D.OP1/1 3.13 358:B/1 2.39 TYR283:B.OH/1
DC26:D.OP1/1 2.26 167:D/1 3.24 LYS276:B.NZ/1
DA4:E.OP1/1 2.66 41:E/1 3.09 ARG243:H.O/1
DA4:E.OP1/1 2.81 42:E/1 2.83 LYS244:H.O/1
DA4:E.O3'/1 3.08 351:H/1 2.87 ARG241:H.NE/1
DA4:E.N3/1 2.85 36:E/1 2.98 ARG241:H.NH2/1
DA11:E.OP2/1 2.42 35:E/1 2.79 HIS91:H.NE2/1
DA4:F.O3'/1 2.79 42:F/1 2.91 ARG241:G.NE/1
DA13:F.N6/1 2.43 209:F/1 2.62 GLN90:G.NE2/1
DA25:F.OP1/1 3.13 358:H/1 2.39 TYR283:H.OH/1
DC26:F.OP1/1 2.26 167:F/1 3.24 LYS276:H.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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