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Nucleic atom dist Protein atom
DT205:C.OP1/1 3.23 ARG154:A.NH2/1
DA206:C.OP1/1 3.05 ARG154:A.NE/1
DA206:C.OP1/1 2.9 ARG154:A.NH2/1
DA206:C.N3/1 2.87 THR173:A.OG1/1
DT207:C.O2/1 3.05 ASN117:A.ND2/1
DG210:C.OP1/1 2.52 SER76:A.OG/1
DT220:D.OP1/1 2.7 ARG56:A.NH1/1
DT221:D.OP2/1 2.87 ARG56:A.NH2/1
DA222:D.OP1/1 3.26 ARG63:A.NE/1
DA222:D.OP1/1 2.9 ARG63:A.NH2/1
DA222:D.N3/1 3.04 ASN27:A.ND2/1
DT223:D.O2/1 3.17 ASN27:A.ND2/1
DA226:D.OP1/1 2.61 SER167:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA222:D.O3'/1 3.19 2026:A/1 2.83 LYS68:A.O/1
DT223:D.OP1/1 2.97 2026:A/1 2.83 LYS68:A.O/1
DT223:D.OP1/1 2.73 2035:A/1 2.56 GLY83:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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