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Nucleic atom dist Protein atom
DG1:C.N2/1 2.85 ASN17:B.OD1/1
DG1:C.N3/1 3.22 ASN17:B.ND2/1
DT5:C.O2/1 2.77 TYR12:A.OH/1
DA6:C.OP1/1 2.83 ARG44:A.NH1/1
DT7:C.OP1/1 3.08 TRP43:A.NE1/1
DG9:C.O4'/1 3.19 ARG7:A.NH1/1
DC10:C.N3/1 2.65 GLU71:A.OE2/1
DC10:C.N4/1 3.13 GLU71:A.OE1/1
DC10:C.N4/1 3.34 GLU71:A.OE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:C.N3/1 2.98 85:A/1 2.46 SER10:A.OG/1
DT7:C.OP1/1 2.84 502:C/1 3.09 TYR12:A.N/1
DT7:C.OP1/1 2.86 517:C/1 3.15 LYS49:A.NZ/1
DT7:C.O4'/1 2.73 85:A/1 2.46 SER10:A.OG/1
DT17:D.O2/1 2.79 21:D/1 2.85 ARG20:A.NH1/1
DT17:D.O2/1 2.79 21:D/1 3.02 ARG20:A.NH2/1
DT17:D.O2/1 2.79 21:D/1 2.88 VAL32:A.O/1
DC18:D.OP1/1 3.09 106:A/1 2.97 ARG20:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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