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Nucleic atom dist Protein atom
DG107:B.OP1/1 2.56 THR506:A.OG1/1
DG107:B.OP1/1 2.92 THR509:A.N/1
DG107:B.OP1/1 2.68 THR509:A.OG1/1
DG107:B.OP2/1 3.32 LYS508:A.N/1
DG107:B.O3'/1 2.87 ARG487:A.NE/1
DG108:B.OP1/1 3.2 ARG487:A.NE/1
DG108:B.OP1/1 3.27 ARG487:A.NH2/1
DG108:B.OP1/1 2.53 THR514:A.N/1
DG108:B.OP1/1 2.74 THR514:A.OG1/1
DG108:B.OP2/1 2.85 SER513:A.OG/1
DG108:B.N2/1 3.01 LYS540:A.NZ/1
DC109:B.OP1/1 2.87 ARG536:A.NH1/1
DC109:B.OP2/1 3 ALA516:A.N/1
DC109:B.O2/1 2.95 LYS540:A.NZ/1
DG110:B.N3/1 3.29 ASN583:A.OD1/1
DC111:B.OP1/1 2.82 VAL586:A.N/1
DC111:B.OP1/1 2.87 ARG587:A.N/1
DDG112:B.OP2/1 2.95 ARG587:A.NE/1
DDG112:B.OP2/1 2.89 ARG587:A.NH2/1
DC204:C.OP1/1 3.33 ARG677:A.NH1/1
DC204:C.OP2/1 2.8 SER674:A.N/1
DC204:C.OP2/1 2.66 SER674:A.OG/1
DC204:C.O3'/1 3.31 ARG746:A.NE/1
DC205:C.OP1/1 3.03 ARG746:A.NE/1
DG206:C.OP1/1 3.06 ARG728:A.NH1/1
DC207:C.OP1/1 2.79 ALA570:A.N/1
DG208:C.OP1/1 3.01 SER575:A.OG/1
DG208:C.O4'/1 3.05 ASN580:A.ND2/1
DC209:C.OP1/1 2.62 ASP578:A.N/1
DC209:C.OP1/1 2.64 ASP578:A.O/1
DT212:C.OP1/1 2.9 ASN483:A.ND2/1
DT212:C.OP1/1 3 ASN485:A.ND2/1
DT212:C.O5'/1 3.19 ASN483:A.ND2/1
DG213:C.OP1/1 2.45 SER486:A.OG/1
DG213:C.OP1/1 3.04 GLN489:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG108:B.N2/1 2.89 3094:A/1 2.87 LYS540:A.NZ/1
DG108:B.N3/1 2.9 3094:A/1 2.87 LYS540:A.NZ/1
DC111:B.O2/1 2.82 3104:A/1 2.73 GLN582:A.O/1
DC111:B.N4/1 3.33 3113:B/1 2.97 ARG587:A.NH1/1
DDG112:B.OP1/1 2.95 3047:A/1 2.67 ARG595:A.NH1/1
DDG112:B.OP1/1 2.95 3047:A/1 2.9 GLU786:A.OE2/1
DDG112:B.OP2/1 2.64 3046:B/1 3.45 ARG587:A.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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