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Nucleic atom dist Protein atom
C1:B.O2'/1 3.03 PRO37:A.O/1
A11:B.O2'/1 2.79 SER124:A.OG/1
U12:B.OP1/1 3.43 ARG115:F.NH2/1
A13:B.OP1/1 3.21 ARG115:F.NH1/1
A13:B.OP2/1 2.85 ARG115:F.NH2/1
A13:B.O2'/1 2.6 GLN107:A.O/1
C14:B.OP1/1 2.51 GLN107:A.NE2/1
C11:C.OP1/1 2.67 LYS71:A.NZ/1
C12:C.OP1/1 3.16 ARG115:A.NH2/1
G13:C.OP1/1 2.97 ARG115:A.NH1/1
G13:C.OP2/1 3.12 ARG115:A.NH2/1
G13:C.O2'/1 3.13 GLN107:F.O/1
C14:C.OP1/1 3.33 GLN107:F.NE2/1
C1:D.O2'/1 3.03 PRO37:F.O/1
A11:D.O2'/1 2.79 SER124:F.OG/1
U12:D.OP1/1 3.43 ARG115:A.NH2/1
A13:D.OP1/1 3.21 ARG115:A.NH1/1
A13:D.OP2/1 2.85 ARG115:A.NH2/1
A13:D.O2'/1 2.6 GLN107:F.O/1
C14:D.OP1/1 2.51 GLN107:F.NE2/1
C11:E.OP1/1 2.67 LYS71:F.NZ/1
C12:E.OP1/1 3.16 ARG115:F.NH2/1
G13:E.OP1/1 2.97 ARG115:F.NH1/1
G13:E.OP2/1 3.12 ARG115:F.NH2/1
G13:E.O2'/1 3.13 GLN107:A.O/1
C14:E.OP1/1 3.33 GLN107:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
G2:B.OP1/1 2.51 31:B/1 2.75 SER36:A.OG/1
U12:B.O2'/1 2.4 39:B/1 3.05 CYS110:A.O/1
U12:B.O2'/1 2.4 39:B/1 2.94 THR111:A.OG1/1
A13:B.OP1/1 2.2 192:F/1 2.81 GLY126:A.N/1
A13:B.OP1/1 2.2 192:F/1 2.57 GLY118:F.O/1
C2:C.OP1/1 2.39 31:D/1 2.75 SER36:F.OG/1
U9:C.O3'/1 3.09 205:A/1 2.58 LYS67:A.O/1
U10:C.OP1/1 2.88 205:A/1 2.58 LYS67:A.O/1
C11:C.O3'/1 2.86 23:C/1 3.25 SER120:A.OG/1
C12:C.O2'/1 2.61 39:D/1 3.05 CYS110:F.O/1
C12:C.O2'/1 2.61 39:D/1 2.94 THR111:F.OG1/1
G2:D.OP1/1 2.51 31:D/1 2.75 SER36:F.OG/1
U12:D.O2'/1 2.4 39:D/1 3.05 CYS110:F.O/1
U12:D.O2'/1 2.4 39:D/1 2.94 THR111:F.OG1/1
A13:D.OP1/1 2.2 192:A/1 2.57 GLY118:A.O/1
A13:D.OP1/1 2.2 192:A/1 2.81 GLY126:F.N/1
C2:E.OP1/1 2.39 31:B/1 2.75 SER36:A.OG/1
U9:E.O3'/1 3.09 205:F/1 2.58 LYS67:F.O/1
U10:E.OP1/1 2.88 205:F/1 2.58 LYS67:F.O/1
C11:E.O3'/1 2.86 23:E/1 3.25 SER120:F.OG/1
C12:E.O2'/1 2.61 39:B/1 3.05 CYS110:A.O/1
C12:E.O2'/1 2.61 39:B/1 2.94 THR111:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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