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Nucleic atom dist Protein atom
DC5:B.OP1/1 3.01 LEU261:A.N/1
DC5:B.OP2/1 2.57 HIS309:A.NE2/1
DT7:B.OP1/1 2.71 TYR89:A.OH/1
DT7:B.OP1/1 2.9 VAL346:A.N/1
DT7:B.OP2/1 2.53 HIS305:A.NE2/1
DC16:C.O2/1 2.54 ARG50:A.NH1/1
DA18:C.OP1/1 2.8 ASN146:A.ND2/1
DA18:C.OP1/1 2.96 ARG149:A.NH2/1
DA18:C.OP2/1 2.97 ARG149:A.NH1/1
DG19:C.OP2/1 2.85 GLN48:A.N/1
DG19:C.OP2/1 2.88 GLN48:A.NE2/1
DT20:C.OP1/1 2.99 GLY124:A.N/1
DT20:C.OP1/1 2.89 THR127:A.N/1
DT20:C.OP1/1 2.76 THR127:A.OG1/1
DT20:C.OP2/1 3.23 TYR126:A.N/1
DC21:C.OP1/1 2.73 GLY122:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:B.O3'/1 2.94 13:B/1 2.97 SER90:A.N/1
DG8:B.OP1/1 2.78 19:B/1 3.05 GLY85:A.O/1
DA18:C.N7/1 3.07 23:C/1 2.92 TRP30:A.NE1/1
DA18:C.N7/1 3.06 441:A/1 2.74 GLU43:A.OE1/1
DA18:C.N6/1 2.81 23:C/1 2.92 TRP30:A.NE1/1
DG19:C.N3/1 3.13 415:A/1 2.78 GLN47:A.OE1/1
DC21:C.OP1/1 3.07 457:A/1 2.6 LEU120:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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