Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT6:B.OP1/1 2.79 LYS254:A.NZ/1
DT8:B.OP1/1 2.85 LYS57:A.NZ/1
DT8:B.OP2/1 2.95 ASN171:A.N/1
DT8:B.OP2/1 2.99 ARG260:A.NH2/1
DT9:B.OP1/1 2.89 HIS72:A.NE2/1
DT9:B.O2/1 3.36 ARG74:A.NH1/1
DT10:B.OP1/1 2.89 LYS129:A.NZ/1
DC23:C.O2/1 2.77 ARG109:A.NE/1
DC23:C.N3/1 3.08 ARG109:A.NH2/1
DA24:C.OP1/1 2.89 LYS110:A.NZ/1
DA25:C.OP1/1 2.75 LYS90:A.NZ/1
DA25:C.OP1/1 2.93 HIS91:A.NE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DT5:B.OP2/1 2.87 347:B/1 3.34 LYS256:A.NZ/1
DT6:B.OP2/1 2.71 5224:A/1 2.47 LYS256:A.NZ/1
DT6:B.O2/1 3.23 5069:A/1 2.59 GLU76:A.OE2/1
DT6:B.O2/1 3.23 5069:A/1 2.88 ARG109:A.NH1/1
DT8:B.OP1/1 2.8 34:B/1 2.97 GLU2:A.N/1
DT8:B.OP2/1 2.8 5101:A/1 2.72 ARG260:A.NH1/1
DT8:B.O4/1 3.29 5127:A/1 2.9 ARG109:A.NH1/1
DT9:B.OP1/1 3.08 5133:A/1 3.02 TYR58:A.OH/1
DT9:B.OP2/1 2.55 69:B/1 2.78 LEU161:A.O/1
DT10:B.OP1/1 2.93 190:B/1 2.93 LYS129:A.NZ/1
DT10:B.OP2/1 2.75 5272:A/1 2.5 TYR58:A.OH/1
DC16:C.O3'/1 2.76 152:C/1 3.01 THR153:A.OG1/1
DG17:C.OP1/1 2.59 152:C/1 3.01 THR153:A.OG1/1
DG17:C.OP1/1 3.25 5094:A/1 2.93 LYS155:A.N/1
DA22:C.N3/1 2.81 12:C/1 3.25 ARG74:A.NH1/1
DC23:C.OP1/1 2.88 259:C/1 3.08 TYR29:A.OH/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text