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Nucleic atom dist Protein atom
DG6:B.N2/1 3.07 SER400:A.O/1
DT7:B.OP2/1 2.86 PHE235:A.N/1
DG8:B.OP1/1 2.66 ARG397:A.NH1/1
DG8:B.N7/1 2.95 ARG234:A.NH2/1
DG8:B.O6/1 2.75 ARG234:A.NH1/1
DG10:B.OP1/1 2.77 LYS476:A.NZ/1
DG10:B.O6/1 2.43 LYS368:A.NZ/1
DC4:C.OP1/1 3.04 GLN374:A.NE2/1
DC4:C.O3'/1 2.95 LYS372:A.NZ/1
DT5:C.OP1/1 2.62 SER370:A.OG/1
DT5:C.OP1/1 2.9 LYS372:A.NZ/1
DT5:C.OP2/1 3.03 LYS371:A.N/1
DT6:C.OP2/1 2.62 SER367:A.OG/1
DT7:C.OP2/1 2.84 LYS227:A.NZ/1
DT7:C.OP2/1 2.49 TYR229:A.OH/1
DA13:C.N3/1 3.14 GLN401:A.NE2/1
DG14:C.OP1/1 2.3 ARG399:A.NH2/1
DG14:C.O4'/1 2.78 GLN401:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG8:B.OP1/1 2.87 16:B/1 2.94 THR537:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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