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Nucleic atom dist Protein atom
DC502:C.OP2/1 2.54 LYS334:B.N/1
DA504:C.OP2/1 2.84 ILE381:B.N/1
DA504:C.N7/1 2.67 GLN338:B.NE2/1
DA504:C.N6/1 3.05 GLN338:B.OE1/1
DG508:C.N7/1 3.48 ARG368:B.NH1/1
DG508:C.O6/1 2.9 ARG368:B.NH2/1
DG513:C.OP1/1 2.85 LYS48:A.NZ/1
DA514:C.OP1/1 2.74 ASP20:A.OD1/1
DA514:C.OP1/1 2.95 GLU47:A.OE1/1
DA514:C.OP2/1 2.41 LYS48:A.N/1
DA514:C.OP2/1 2.76 ARG51:A.NH2/1
DG515:C.OP2/1 2.85 GLY19:A.O/1
DG515:C.N7/1 2.95 ARG70:A.NH2/1
DG515:C.O6/1 2.71 ARG70:A.NH1/1
DA516:C.OP1/1 2.97 ASP137:A.N/1
DA516:C.OP2/1 2.73 SER22:A.OG/1
DA516:C.N7/1 2.91 GLN44:A.NE2/1
DC517:C.OP1/1 2.69 SER138:A.OG/1
DA518:C.OP1/1 2.73 LYS142:A.N/1
DG519:C.OP1/1 2.78 LYS142:A.NZ/1
DG552:D.OP2/1 2.93 SER32:A.O/1
DG552:D.N7/1 3.06 SER32:A.OG/1
DA554:D.OP1/1 3.13 SER79:A.O/1
DA554:D.OP1/1 2.51 ILE81:A.N/1
DA554:D.N7/1 2.85 GLN38:A.NE2/1
DA554:D.N6/1 2.62 GLN38:A.OE1/1
DG558:D.N7/1 3.06 ARG68:A.NH1/1
DG558:D.O6/1 2.67 ARG68:A.NH2/1
DT559:D.O4/1 2.98 ARG68:A.NH2/1
DT559:D.O4/1 3.24 ARG70:A.NH1/1
DA563:D.OP1/1 2.9 LYS139:A.NZ/1
DC564:D.OP1/1 3.12 GLU347:B.OE1/1
DC564:D.OP2/1 3.14 LYS348:B.N/1
DC564:D.OP2/1 3.01 ARG351:B.NH2/1
DG565:D.OP2/1 2.68 GLY319:B.O/1
DG565:D.N7/1 3.43 ARG370:B.NH2/1
DG565:D.O6/1 3.26 ARG370:B.NH1/1
DA566:D.OP1/1 3.12 ASP437:B.N/1
DA566:D.OP2/1 2.61 SER322:B.OG/1
DA566:D.OP2/1 3.05 LYS398:B.NZ/1
DA566:D.N7/1 3.54 GLN344:B.NE2/1
DC567:D.OP1/1 2.66 SER438:B.OG/1
DC567:D.OP2/1 3.38 ASN436:B.ND2/1
DG568:D.OP1/1 2.45 LYS442:B.N/1
DG568:D.OP1/1 2.68 THR443:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT503:C.OP2/1 2.9 18:B/1 2.46 LEU339:B.N/1
DA505:C.OP2/1 2.63 20:C/1 2.78 SER379:B.N/1
DA505:C.OP2/1 2.63 20:C/1 3.13 GLU380:B.N/1
DA514:C.OP1/1 2.95 619:A/1 2.72 GLU47:A.OE2/1
DG515:C.N2/1 3.01 616:A/1 2.84 LYS139:A.NZ/1
DA516:C.OP2/1 2.88 604:A/1 2.81 ILE23:A.N/1
DA516:C.OP2/1 2.88 604:A/1 3.19 LYS98:A.NZ/1
DA516:C.OP2/1 2.88 604:A/1 2.9 ASN136:A.OD1/1
DA516:C.O3'/1 2.79 615:A/1 3.06 SER138:A.OG/1
DA516:C.O3'/1 2.79 615:A/1 2.55 LYS139:A.N/1
DA516:C.O3'/1 2.79 615:A/1 2.9 THR140:A.N/1
DA516:C.N6/1 3.12 622:A/1 2.61 GLN44:A.OE1/1
DA516:C.N6/1 3.12 622:A/1 3.35 ARG68:A.NH2/1
DC517:C.OP1/1 2.87 615:A/1 3.06 SER138:A.OG/1
DC517:C.OP1/1 2.87 615:A/1 2.55 LYS139:A.N/1
DC517:C.OP1/1 2.87 615:A/1 2.9 THR140:A.N/1
DC517:C.N4/1 3.37 622:A/1 2.61 GLN44:A.OE1/1
DA518:C.N6/1 3.42 605:A/1 2.58 GLN26:A.NE2/1
DT520:C.O4/1 3.01 631:A/1 2.81 GLN38:A.OE1/1
DA554:D.OP2/1 2.64 630:A/1 2.64 GLN38:A.NE2/1
DA554:D.OP2/1 2.83 28:D/1 2.84 LEU41:A.N/1
DA554:D.OP2/1 2.83 28:D/1 3.11 LEU41:A.O/1
DA554:D.OP2/1 2.83 28:D/1 2.91 SER79:A.O/1
DA555:D.OP2/1 3.06 612:A/1 2.61 TYR66:A.OH/1
DG565:D.N2/1 2.51 29:D/1 2.84 LYS439:B.NZ/1
DA566:D.OP2/1 2.46 37:D/1 3.09 ILE323:B.N/1
DA566:D.OP2/1 2.46 37:D/1 2.8 LYS398:B.NZ/1
DA566:D.OP2/1 2.46 37:D/1 3.01 ASN436:B.OD1/1
DG568:D.OP2/1 3.06 81:B/1 2.48 ILE327:B.O/1
DG568:D.O6/1 2.72 12:D/1 2.72 GLN326:B.NE2/1
DG568:D.O6/1 2.72 12:D/1 3.36 LYS328:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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