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Nucleic atom dist Protein atom
DC5:B.OP2/1 2.73 HIS309:A.NE2/1
DT7:B.OP1/1 2.66 TYR89:A.OH/1
DT7:B.OP1/1 2.74 VAL346:A.N/1
DT7:B.OP2/1 2.58 HIS305:A.NE2/1
DA17:C.OP1/1 3.1 ARG149:A.NH1/1
DA17:C.OP2/1 3.09 ARG149:A.NH1/1
DG19:C.OP1/1 3.26 GLY145:A.N/1
DG19:C.OP2/1 2.54 GLY145:A.N/1
DG19:C.OP2/1 2.86 GLN48:A.N/1
DG19:C.O4'/1 3.04 GLN48:A.OE1/1
DG19:C.O4'/1 2.99 GLN48:A.OE1/1
DT20:C.OP1/1 2.77 GLY124:A.N/1
DT20:C.OP1/1 2.86 THR127:A.N/1
DT20:C.OP1/1 2.68 THR127:A.OG1/1
DT20:C.OP2/1 3.2 TYR126:A.N/1
DC21:C.OP1/1 2.74 GLY122:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:B.O3'/1 2.94 12:B/1 3.03 SER90:A.N/1
DT7:B.OP2/1 2.59 15:B/1 2.87 HIS305:A.NE2/1
DT7:B.OP2/1 2.59 15:B/1 2.77 SER347:A.OG/1
DG8:B.OP1/1 2.57 16:B/1 2.89 GLY85:A.O/1
DG19:C.O6/1 3.1 24:C/1 3.14 TYR88:A.OH/1
DC21:C.OP1/1 3.11 504:A/1 2.8 LEU120:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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