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Nucleic atom dist Protein atom
DT6:B.OP1/1 2.84 LYS254:A.NZ/1
DT8:B.OP1/1 2.73 LYS57:A.NZ/1
DT8:B.OP2/1 3.08 ASN171:A.N/1
DT8:B.OP2/1 2.97 ARG260:A.NH2/1
DT9:B.OP1/1 2.85 HIS72:A.NE2/1
DT9:B.OP2/1 3.1 LYS57:A.NZ/1
DT10:B.OP1/1 2.89 LYS129:A.NZ/1
DC23:C.O2/1 2.7 ARG109:A.NE/1
DC23:C.N3/1 3.08 ARG109:A.NH2/1
DA24:C.OP1/1 2.87 LYS110:A.NZ/1
DA25:C.OP1/1 3.13 HIS91:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:B.OP2/1 2.84 191:B/1 3.44 LYS256:A.NZ/1
DT6:B.OP2/1 2.74 5157:A/1 2.72 LYS256:A.NZ/1
DT6:B.OP2/1 3.21 23:B/1 3.03 GLY261:A.N/1
DT8:B.OP2/1 2.82 5018:A/1 2.7 ARG260:A.NH1/1
DT8:B.O4/1 3.25 5053:A/1 2.89 ARG109:A.NH1/1
DT10:B.OP2/1 2.73 5172:A/1 2.57 TYR58:A.OH/1
DT10:B.OP2/1 2.74 120:B/1 2.84 LYS129:A.O/1
DC16:C.OP1/1 2.89 379:C/1 2.72 LYS154:A.NZ/1
DC16:C.OP2/1 2.72 379:C/1 2.72 LYS154:A.NZ/1
DA22:C.N3/1 2.72 171:C/1 3.43 ARG74:A.NH1/1
DC23:C.N4/1 3.02 5122:A/1 2.97 ARG109:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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