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Nucleic atom dist Protein atom
DG4:E.OP2/1 2.7 TYR199:A.OH/1
DG5:E.OP1/1 2.78 LYS248:A.NZ/1
DG5:E.OP2/1 2.92 ARG241:A.NH1/1
DG5:E.N7/1 3.32 ASN201:A.ND2/1
DT6:E.OP2/1 2.82 SER144:B.OG/1
DC7:E.OP1/1 2.68 LYS147:B.NZ/1
DC7:E.OP2/1 3.07 SER144:B.N/1
DC7:E.OP2/1 2.65 GLN207:B.NE2/1
DC7:E.O2/1 2.99 GLN109:B.NE2/1
DG8:F.OP2/1 2.77 ASP114:B.OD2/1
DG8:F.N7/1 3.32 ASN141:B.ND2/1
DG8:F.N2/1 3.47 GLN109:A.OE1/1
DA9:F.OP1/1 3 THR130:B.N/1
DA9:F.N7/1 3.15 ASN141:B.N/1
DA9:F.N6/1 3.06 ASN141:B.OD1/1
DA9:F.N3/1 2.86 GLN109:A.OE1/1
DC10:F.OP1/1 2.86 ASN132:B.N/1
DC10:F.N4/1 2.58 ALA139:B.O/1
DC11:F.OP2/1 2.76 LYS135:B.NZ/1
DG12:F.OP1/1 3.21 LYS108:A.NZ/1
DG13:F.OP1/1 3.21 LYS93:A.N/1
DG4:G.OP2/1 2.72 TYR199:B.OH/1
DG5:G.OP1/1 3.18 LYS248:B.NZ/1
DG5:G.OP2/1 3.2 ARG241:B.NH1/1
DG5:G.O5'/1 3.44 LYS248:B.NZ/1
DG5:G.N7/1 3.06 ASN201:B.ND2/1
DG5:G.O6/1 3.2 GLN209:B.NE2/1
DT6:G.OP2/1 2.6 SER144:A.OG/1
DC7:G.OP1/1 2.41 LYS147:A.NZ/1
DC7:G.OP2/1 2.9 GLN207:A.NE2/1
DC7:G.O3'/1 2.41 GLN109:A.O/1
DC7:G.O2/1 3 GLN109:A.OE1/1
DG8:H.OP2/1 2.55 ASP114:A.OD2/1
DG8:H.N7/1 3.04 ASN141:A.ND2/1
DA9:H.OP1/1 3.27 THR130:A.N/1
DA9:H.OP1/1 3 THR130:A.OG1/1
DA9:H.N7/1 3.05 ASN141:A.N/1
DA9:H.N6/1 2.93 ASN141:A.OD1/1
DA9:H.N3/1 3.17 GLN109:B.NE2/1
DC10:H.OP1/1 2.88 ASN132:A.N/1
DC10:H.N4/1 3.18 ALA139:A.O/1
DC11:H.OP2/1 2.92 LYS135:A.NZ/1
DG13:H.OP1/1 2.98 LYS93:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG4:E.O6/1 2.77 10:E/1 3.48 ALA139:A.N/1
DG5:E.OP1/1 3.09 284:A/1 2.69 ARG241:A.NH1/1
DG5:E.OP2/1 3.04 282:A/1 2.49 ASN201:A.OD1/1
DG5:E.OP2/1 3.04 282:A/1 2.76 ALA203:A.N/1
DG5:E.OP2/1 3.04 282:A/1 3.27 ARG241:A.NH1/1
DG5:E.N7/1 2.66 11:E/1 3.31 GLN138:A.NE2/1
DG5:E.N7/1 2.66 11:E/1 2.39 ASN201:A.ND2/1
DG5:E.N7/1 2.66 11:E/1 2.4 GLN209:A.NE2/1
DG5:E.O6/1 2.27 11:E/1 3.31 GLN138:A.NE2/1
DG5:E.O6/1 2.27 11:E/1 2.39 ASN201:A.ND2/1
DG5:E.O6/1 2.27 11:E/1 2.94 GLN209:A.OE1/1
DG5:E.O6/1 2.27 11:E/1 2.4 GLN209:A.NE2/1
DC7:E.O3'/1 2.37 8:E/1 2.68 ASP114:B.OD2/1
DG8:F.OP2/1 2.88 280:B/1 3.12 ASP114:B.OD1/1
DG8:F.OP2/1 2.97 393:B/1 2.94 ASP114:B.OD1/1
DG8:F.OP2/1 2.66 8:E/1 2.68 ASP114:B.OD2/1
DG8:F.OP2/1 2.88 280:B/1 2.72 ASP127:B.OD2/1
DG8:F.OP2/1 2.97 393:B/1 2.94 VAL128:B.O/1
DA9:F.OP2/1 2.62 281:B/1 2.59 ASN141:B.O/1
DC10:F.OP1/1 2.77 103:F/1 2.79 THR130:B.OG1/1
DC11:F.O4'/1 2.95 282:B/1 2.89 GLN138:B.N/1
DG13:F.OP1/1 2.35 44:F/1 2.76 ALA94:A.N/1
DG5:G.OP1/1 2.18 119:G/1 3.03 ARG241:B.NH1/1
DG5:G.O5'/1 2.71 531:G/1 2.81 LYS248:B.NZ/1
DT6:G.O4/1 3.11 405:B/1 3.04 ASN141:B.ND2/1
DC7:G.N4/1 3.37 383:A/1 2.63 ASN141:A.ND2/1
DG8:H.OP1/1 2.98 361:A/1 2.91 ASP114:A.OD1/1
DG8:H.OP1/1 2.98 361:A/1 3.09 VAL128:A.O/1
DG8:H.OP2/1 3.06 272:A/1 2.83 ASP127:A.OD2/1
DG8:H.O6/1 2.68 383:A/1 2.63 ASN141:A.ND2/1
DC10:H.O3'/1 2.8 443:H/1 3.26 GLN109:B.N/1
DC11:H.OP2/1 2.63 443:H/1 3.26 GLN109:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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