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Nucleic atom dist Protein atom
DG4:I.OP2/1 2.86 TYR199:C.OH/1
DG5:I.N7/1 3.1 ASN201:C.ND2/1
DG5:I.O6/1 2.68 GLN138:C.NE2/1
DG5:I.O6/1 3.46 ASN201:C.ND2/1
DT6:I.OP2/1 2.66 SER144:D.OG/1
DC7:I.OP1/1 2.9 LYS147:D.NZ/1
DC7:I.OP2/1 3.08 SER144:D.N/1
DG8:J.OP1/1 2.58 GLU35:D.OE2/1
DG8:J.OP2/1 2.5 ASP114:D.OD2/1
DG8:J.N7/1 3.32 ASN141:D.ND2/1
DA9:J.OP1/1 3.33 THR130:D.N/1
DA9:J.OP1/1 2.94 THR130:D.OG1/1
DA9:J.N7/1 3.14 ASN141:D.N/1
DA9:J.N6/1 2.57 ASN141:D.OD1/1
DC10:J.N4/1 2.68 ALA139:D.O/1
DC11:J.OP2/1 2.86 LYS135:D.NZ/1
DG13:J.OP1/1 2.67 LYS93:C.N/1
DG13:J.O5'/1 3.34 LYS93:C.N/1
DG13:J.O3'/1 2.95 SER90:C.O/1
DG13:J.O3'/1 3.05 SER90:C.OG/1
DG13:J.O3'/1 3.28 ARG91:C.O/1
DG4:K.O5'/1 2.99 TYR199:D.OH/1
DG5:K.O5'/1 3.41 LYS248:D.NZ/1
DG5:K.N7/1 2.6 ASN201:D.ND2/1
DG5:K.O6/1 3.09 GLN138:D.NE2/1
DT6:K.OP2/1 2.6 SER144:C.OG/1
DG8:L.OP1/1 2.52 ASP114:C.OD2/1
DG8:L.OP2/1 3.05 GLU35:C.OE1/1
DG8:L.N7/1 2.77 ASN141:C.ND2/1
DA9:L.OP1/1 3.34 THR130:C.N/1
DA9:L.OP1/1 3.13 THR130:C.OG1/1
DA9:L.N7/1 3.12 ASN141:C.N/1
DA9:L.N7/1 3.15 ASN141:C.OD1/1
DA9:L.N6/1 2.95 ASN141:C.OD1/1
DC10:L.OP1/1 3.06 THR130:C.O/1
DC10:L.OP1/1 2.96 ASN132:C.N/1
DC10:L.N4/1 3.47 GLN138:C.NE2/1
DC10:L.N4/1 2.72 ALA139:C.O/1
DC10:L.N4/1 2.89 GLN209:C.NE2/1
DG13:L.OP1/1 3.18 LYS93:D.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:I.OP1/1 2.82 509:I/1 2.98 THR112:D.O/1
DC7:I.O3'/1 2.27 508:I/1 3.01 ASP114:D.OD2/1
DC7:I.O3'/1 2.27 508:I/1 3.11 ASP127:D.OD2/1
DG8:J.OP1/1 2.8 259:D/1 2.68 ASP114:D.OD1/1
DG8:J.OP1/1 2.8 259:D/1 2.49 VAL128:D.O/1
DA9:J.OP1/1 3.11 308:D/1 3.08 GLY34:D.N/1
DC10:J.OP1/1 2.83 266:D/1 2.68 LEU28:D.O/1
DC10:J.OP1/1 2.83 266:D/1 3.16 ASN132:D.ND2/1
DC10:J.O5'/1 2.8 266:D/1 2.68 LEU28:D.O/1
DC10:J.O5'/1 2.8 266:D/1 3.16 ASN132:D.ND2/1
DC10:J.O4'/1 2.82 281:C/1 2.53 GLN109:C.NE2/1
DC10:J.O4'/1 2.82 281:C/1 3.07 GLY30:D.N/1
DC11:J.OP2/1 2.86 327:C/1 2.82 GLN109:C.N/1
DC7:K.OP1/1 2.79 272:C/1 2.5 THR112:C.O/1
DC7:K.O3'/1 2.38 8:K/1 2.51 ASP114:C.OD1/1
DG8:L.OP1/1 2.43 3:L/1 2.97 ASP114:C.OD1/1
DG8:L.OP1/1 2.43 3:L/1 2.71 ASP114:C.OD2/1
DG8:L.OP1/1 2.43 3:L/1 2.95 ASP127:C.OD1/1
DG8:L.O5'/1 2.41 3:L/1 2.97 ASP114:C.OD1/1
DG8:L.O5'/1 2.41 3:L/1 2.71 ASP114:C.OD2/1
DG8:L.O5'/1 2.41 3:L/1 2.95 ASP127:C.OD1/1
DG8:L.O5'/1 2.41 3:L/1 3.07 VAL128:C.O/1
DG8:L.O5'/1 3.14 274:C/1 3.23 LYS129:C.NZ/1
DA9:L.O3'/1 3.02 329:C/1 2.43 GLY30:C.N/1
DA9:L.O3'/1 3.02 329:C/1 2.87 GLN109:D.NE2/1
DC10:L.OP1/1 3.08 269:C/1 3.24 GLY34:C.N/1
DC10:L.OP1/1 3.08 269:C/1 2.73 THR130:C.O/1
DC10:L.OP1/1 3.08 269:C/1 2.61 THR130:C.OG1/1
DC10:L.OP1/1 3.08 269:C/1 3.07 TRP173:C.NE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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