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Nucleic atom dist Protein atom
DC4:B.OP1/1 2.91 LYS521:A.NZ/1
DA5:B.OP2/1 2.98 ARG517:A.NE/1
DA5:B.OP2/1 3.13 ARG517:A.NH2/1
DA5:B.O4'/1 3.07 ARG517:A.NE/1
DC9:B.OP1/1 2.72 GLU466:A.N/1
DC11:B.OP1/1 2.96 THR371:A.OG1/1
DC4:C.OP1/1 2.65 GLY345:A.N/1
DC4:C.OP1/1 2.84 THR348:A.N/1
DC4:C.OP1/1 2.88 THR348:A.OG1/1
DC4:C.OP2/1 3.15 LYS347:A.N/1
DG5:C.OP1/1 2.82 GLY343:A.N/1
DC6:C.OP1/1 3.24 TRP342:A.NE1/1
DC6:C.OP1/1 2.71 ARG488:A.NH2/1
DC6:C.O3'/1 2.82 LYS472:A.NZ/1
DG1:D.OP1/1 2.77 TYR267:A.OH/1
DG1:D.OP1/1 2.66 TYR279:A.OH/1
DG1:D.OP2/1 2.71 ARG308:A.NH2/1
DC2:D.OP1/1 2.83 GLY306:A.N/1
DC2:D.OP1/1 3.06 MET309:A.N/1
DC3:D.OP1/1 2.9 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:B.O3'/1 3.08 210:B/1 2.86 ARG514:A.O/1
DA5:B.OP2/1 2.79 210:B/1 2.86 ARG514:A.O/1
DA5:B.N6/1 2.64 112:B/1 2.76 TYR505:A.OH/1
DG8:B.OP1/1 2.89 493:B/1 3.04 GLY468:A.N/1
DC9:B.OP1/1 2.58 355:B/1 3 GLN464:A.O/1
DC9:B.OP1/1 2.58 355:B/1 3.15 GLN464:A.OE1/1
DC9:B.OP2/1 2.91 974:A/1 2.89 GLU466:A.O/1
DA10:B.OP1/1 2.91 972:A/1 2.87 SER463:A.N/1
DA10:B.OP1/1 3.11 1042:A/1 3.14 GLN464:A.N/1
DA10:B.OP1/1 3.11 1042:A/1 2.63 GLN464:A.O/1
DA10:B.O3'/1 2.77 234:B/1 3.07 GLN372:A.N/1
DG5:C.N2/1 3 1039:A/1 2.96 GLU465:A.OE1/1
DG5:C.N2/1 3 1039:A/1 3.07 GLU465:A.OE2/1
DG5:C.N2/1 3 1039:A/1 2.96 LYS472:A.NZ/1
DC6:C.O3'/1 2.58 966:A/1 3.15 ASP429:A.OD1/1
DC6:C.O3'/1 2.58 966:A/1 2.49 ASP490:A.OD1/1
DC2:D.OP2/1 2.82 43:D/1 3.03 ARG308:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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