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Nucleic atom dist Protein atom
DG3:J.O3'/1 3.09 LYS521:I.NZ/1
DC4:J.OP1/1 3.02 LYS521:I.NZ/1
DA5:J.OP2/1 3 ARG517:I.NE/1
DA5:J.OP2/1 3.16 ARG517:I.NH2/1
DA5:J.O4'/1 3.05 ARG517:I.NE/1
DC9:J.OP1/1 2.85 GLU466:I.N/1
DC11:J.OP1/1 3.2 THR371:I.N/1
DC11:J.OP1/1 2.66 THR371:I.OG1/1
DC4:K.OP1/1 2.77 GLY345:I.N/1
DC4:K.OP1/1 2.9 THR348:I.N/1
DC4:K.OP1/1 2.82 THR348:I.OG1/1
DC4:K.OP2/1 3.23 LYS347:I.N/1
DG5:K.OP1/1 2.67 GLY343:I.N/1
DC6:K.OP1/1 3.26 TRP342:I.NE1/1
DC6:K.OP1/1 3.06 ARG488:I.NH2/1
DG1:L.OP1/1 3.4 ARG275:I.NE/1
DG1:L.OP1/1 2.65 TYR279:I.OH/1
DG1:L.OP2/1 3.36 ARG275:I.NE/1
DG1:L.OP2/1 2.84 ARG275:I.NH2/1
DG1:L.OP2/1 2.96 ARG308:I.NH2/1
DC2:L.OP1/1 3.07 GLY306:I.N/1
DC2:L.OP1/1 2.83 MET309:I.N/1
DC3:L.OP1/1 2.81 GLY304:I.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:J.OP1/1 2.82 851:J/1 2.83 ARG514:I.NH1/1
DA5:J.OP2/1 2.74 142:J/1 2.76 ARG514:I.O/1
DA5:J.N6/1 3.26 978:I/1 3.22 ASN513:I.ND2/1
DA5:J.N6/1 3.26 978:I/1 3.17 ARG517:I.NH1/1
DG8:J.N3/1 3.13 1043:I/1 2.56 GLU465:I.OE2/1
DC9:J.O4'/1 2.92 1043:I/1 2.56 GLU465:I.OE2/1
DA10:J.OP1/1 2.74 977:I/1 2.68 SER463:I.N/1
DA10:J.OP1/1 2.75 66:J/1 3.04 SER463:I.OG/1
DA10:J.OP1/1 2.75 66:J/1 3.28 GLN464:I.N/1
DA10:J.OP1/1 2.75 66:J/1 2.99 GLN464:I.O/1
DA10:J.O3'/1 2.89 494:J/1 3.02 GLN372:I.N/1
DG5:K.N2/1 2.8 980:I/1 2.69 GLU465:I.OE2/1
DC6:K.O3'/1 2.77 1011:I/1 3.26 ASP429:I.OD1/1
DC6:K.O3'/1 2.77 1011:I/1 2.75 ASP490:I.OD1/1
DC2:L.OP2/1 2.93 231:L/1 2.99 ARG308:I.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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