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Nucleic atom dist Protein atom
DG3:T.OP1/1 2.58 HIS541:A.ND1/1
DC4:T.OP1/1 2.49 LYS521:A.NZ/1
DC5:T.OP1/1 2.73 ARG514:A.NH2/1
DC5:T.OP2/1 2.85 ARG514:A.NE/1
DG6:T.OP2/1 2.76 LYS521:A.NZ/1
DG6:T.N2/1 2.84 GLU529:A.OE2/1
DG6:T.N3/1 3.02 ARG517:A.NH1/1
DA8:T.OP1/1 2.81 GLN471:A.NE2/1
DA8:T.OP1/1 2.82 HIS530:A.NE2/1
DC9:T.OP1/1 3.2 GLN471:A.N/1
DC9:T.OP1/1 3.32 LYS472:A.N/1
DT10:T.OP1/1 2.94 SER463:A.N/1
DT4:P.OP1/1 2.78 GLY345:A.N/1
DT4:P.OP1/1 2.8 THR348:A.N/1
DT4:P.OP1/1 2.7 THR348:A.OG1/1
DT4:P.OP2/1 3.12 LYS347:A.N/1
DA5:P.OP1/1 2.77 GLY343:A.N/1
DC6:P.OP1/1 3.11 TRP342:A.NE1/1
DC6:P.O2/1 2.7 TYR505:A.OH/1
DG7:P.OP1/1 2.65 ASP427:A.OD2/1
DG7:P.OP1/1 2.65 ASP429:A.OD1/1
DG7:P.N3/1 3.17 ASN513:A.ND2/1
DG1:D.OP2/1 2.8 ARG308:A.NH1/1
DC2:D.OP1/1 2.72 GLY306:A.N/1
DC2:D.OP1/1 3.04 MET309:A.N/1
DC3:D.OP1/1 2.56 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.OP2/1 2.72 42:T/1 2.93 LYS281:A.NZ/1
DG6:T.OP1/1 2.62 14:T/1 2.78 ARG517:A.O/1
DG6:T.OP1/1 2.62 14:T/1 3.12 LEU527:A.N/1
DG6:T.OP2/1 3 617:A/1 2.95 ARG538:A.NE/1
DT7:T.OP1/1 2.7 634:A/1 2.53 SER526:A.OG/1
DT7:T.OP1/1 2.63 24:T/1 2.74 SER528:A.OG/1
DT7:T.O5'/1 3.15 24:T/1 2.74 SER528:A.OG/1
DC9:T.OP1/1 2.72 13:T/1 2.99 GLN464:A.N/1
DC9:T.OP1/1 2.72 13:T/1 2.75 LYS472:A.O/1
DC9:T.OP2/1 2.6 58:T/1 2.73 GLN464:A.NE2/1
DC9:T.OP2/1 2.69 592:A/1 2.67 GLN469:A.O/1
DC9:T.OP2/1 2.69 592:A/1 3.19 GLN471:A.NE2/1
DC9:T.O2/1 2.82 25:T/1 2.87 GLN372:A.NE2/1
DT10:T.OP2/1 2.76 44:T/1 2.93 GLU466:A.OE2/1
DT10:T.O4'/1 2.98 25:T/1 2.87 GLN372:A.NE2/1
DG11:T.OP1/1 3 611:A/1 2.91 THR371:A.N/1
DG11:T.OP1/1 2.93 726:A/1 2.61 THR371:A.OG1/1
DG11:T.OP1/1 3.16 597:A/1 3.05 GLN372:A.N/1
DA5:P.N3/1 2.6 12:P/1 3.07 LYS472:A.NZ/1
DC6:P.OP1/1 2.71 616:A/1 2.97 ASP427:A.OD2/1
DC6:P.OP1/1 2.71 616:A/1 2.67 ARG488:A.NH1/1
DG7:P.OP2/1 2.68 126:P/1 3.16 ASP427:A.OD2/1
DG7:P.OP2/1 2.68 126:P/1 3.22 ARG488:A.NH1/1
DG1:D.OP1/1 2.65 685:A/1 2.91 TYR267:A.OH/1
DG1:D.OP1/1 2.65 685:A/1 2.49 TYR279:A.OH/1
DG1:D.OP2/1 2.6 138:D/1 3.32 ARG275:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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