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Nucleic atom dist Protein atom
DG4:C.OP1/1 2.57 THR275:B.N/1
DG4:C.OP1/1 2.95 THR275:B.OG1/1
DG4:C.OP2/1 2.73 TRP198:B.NE1/1
DT5:C.OP2/1 2.54 THR284:B.OG1/1
DC10:C.OP1/1 2.5 LYS136:B.NZ/1
DT11:C.OP1/1 3.31 ARG176:B.NH2/1
DT11:C.OP2/1 2.93 SER139:B.N/1
DT11:C.OP2/1 2.82 SER139:B.OG/1
DT12:C.OP1/1 2.61 ARG176:B.N/1
DT12:C.OP1/1 2.97 ARG177:B.N/1
DT13:C.OP2/1 3.43 ARG346:B.NH2/1
DT13:C.O2/1 2.67 LYS235:B.NZ/1
DT14:D.OP1/1 3.17 LYS334:B.N/1
DT21:D.OP2/1 2.36 TYR100:A.OH/1
DA22:D.OP2/1 2.7 LYS93:A.N/1
DA22:D.OP2/1 2.56 THR96:A.OG1/1
DA23:D.OP1/1 2.64 SER234:A.OG/1
DA23:D.OP2/1 2.57 LYS93:A.NZ/1
DA23:D.N7/1 3.17 ASN99:A.ND2/1
DA23:D.N6/1 3.15 ASN99:A.OD1/1
DG24:D.OP1/1 2.94 GLY214:A.N/1
DG24:D.O6/1 2.86 LYS95:A.NZ/1
DT25:D.OP1/1 2.95 HIS308:A.N/1
DT25:D.OP2/1 2.87 SER286:A.OG/1
DT26:D.OP1/1 2.92 ARG293:A.NH1/1
DG27:D.OP1/1 3.28 LYS294:A.NZ/1
DG27:D.N7/1 2.33 ARG287:A.NH2/1
DG27:D.O6/1 2.58 ARG287:A.NH2/1
DG28:D.O6/1 3.29 ARG287:A.NH2/1
DT37:E.OP1/1 2.91 SER274:A.OG/1
DT37:E.OP1/1 2.56 THR275:A.N/1
DT37:E.OP2/1 3.37 TRP198:A.NE1/1
DT37:E.O5'/1 3.07 SER274:A.OG/1
DG38:E.OP2/1 3.15 SER281:A.N/1
DG38:E.OP2/1 2.96 SER281:A.OG/1
DG38:E.OP2/1 2.73 THR284:A.OG1/1
DC39:E.N4/1 3.3 ARG287:A.NH1/1
DC43:E.OP1/1 2.36 LYS136:A.NZ/1
DT44:E.OP2/1 2.63 SER139:A.OG/1
DT45:E.OP1/1 2.81 ARG176:A.N/1
DT45:E.OP1/1 3.23 ARG177:A.N/1
DA46:E.N3/1 3.24 LYS235:A.NZ/1
DG47:E.OP1/1 3.24 HIS308:A.NE2/1
DG47:E.OP2/1 3.36 ARG311:A.NE/1
DG47:E.OP2/1 3.4 ARG311:A.NH2/1
DG47:E.O5'/1 3.34 ARG212:A.NE/1
DG47:E.O5'/1 2.66 ARG212:A.NH2/1
DT48:E.OP1/1 2.99 LYS334:A.N/1
DA54:E.OP2/1 3.14 ARG90:B.NH1/1
DA54:E.OP2/1 2.49 TYR100:B.OH/1
DA55:E.OP2/1 2.99 LYS93:B.N/1
DA55:E.OP2/1 2.45 THR96:B.OG1/1
DA56:E.OP1/1 2.58 SER234:B.OG/1
DA56:E.N7/1 3.21 ASN99:B.ND2/1
DA56:E.N6/1 3.16 ASN99:B.OD1/1
DG57:E.OP1/1 2.79 GLY214:B.N/1
DG57:E.O6/1 2.81 LYS95:B.NZ/1
DC58:E.OP1/1 2.63 THR306:B.OG1/1
DC58:E.OP1/1 2.83 HIS308:B.N/1
DC58:E.OP2/1 2.72 SER286:B.OG/1
DT59:E.OP1/1 3.31 ARG293:B.NH1/1
DG60:E.O6/1 2.81 ARG287:B.NH2/1
DG4:C.OP1/2 2.57 THR275:B.N/2
DG4:C.OP1/2 2.95 THR275:B.OG1/2
DG4:C.OP2/2 2.73 TRP198:B.NE1/2
DT5:C.OP2/2 2.54 THR284:B.OG1/2
DC10:C.OP1/2 2.5 LYS136:B.NZ/2
DT11:C.OP1/2 3.31 ARG176:B.NH2/2
DT11:C.OP2/2 2.93 SER139:B.N/2
DT11:C.OP2/2 2.82 SER139:B.OG/2
DT12:C.OP1/2 2.61 ARG176:B.N/2
DT12:C.OP1/2 2.97 ARG177:B.N/2
DT13:C.OP2/2 3.43 ARG346:B.NH2/2
DT13:C.O2/2 2.67 LYS235:B.NZ/2
DT14:D.OP1/2 3.17 LYS334:B.N/2
DT21:D.OP2/2 2.36 TYR100:A.OH/2
DA22:D.OP2/2 2.7 LYS93:A.N/2
DA22:D.OP2/2 2.56 THR96:A.OG1/2
DA23:D.OP1/2 2.64 SER234:A.OG/2
DA23:D.OP2/2 2.57 LYS93:A.NZ/2
DA23:D.N7/2 3.17 ASN99:A.ND2/2
DA23:D.N6/2 3.15 ASN99:A.OD1/2
DG24:D.OP1/2 2.94 GLY214:A.N/2
DG24:D.O6/2 2.86 LYS95:A.NZ/2
DT25:D.OP1/2 2.95 HIS308:A.N/2
DT25:D.OP2/2 2.87 SER286:A.OG/2
DT26:D.OP1/2 2.92 ARG293:A.NH1/2
DG27:D.OP1/2 3.28 LYS294:A.NZ/2
DG27:D.N7/2 2.33 ARG287:A.NH2/2
DG27:D.O6/2 2.58 ARG287:A.NH2/2
DG28:D.O6/2 3.29 ARG287:A.NH2/2
DT37:E.OP1/2 2.91 SER274:A.OG/2
DT37:E.OP1/2 2.56 THR275:A.N/2
DT37:E.OP2/2 3.37 TRP198:A.NE1/2
DT37:E.O5'/2 3.07 SER274:A.OG/2
DG38:E.OP2/2 3.15 SER281:A.N/2
DG38:E.OP2/2 2.96 SER281:A.OG/2
DG38:E.OP2/2 2.73 THR284:A.OG1/2
DC39:E.N4/2 3.3 ARG287:A.NH1/2
DC43:E.OP1/2 2.36 LYS136:A.NZ/2
DT44:E.OP2/2 2.63 SER139:A.OG/2
DT45:E.OP1/2 2.81 ARG176:A.N/2
DT45:E.OP1/2 3.23 ARG177:A.N/2
DA46:E.N3/2 3.24 LYS235:A.NZ/2
DG47:E.OP1/2 3.24 HIS308:A.NE2/2
DG47:E.OP2/2 3.36 ARG311:A.NE/2
DG47:E.OP2/2 3.4 ARG311:A.NH2/2
DG47:E.O5'/2 3.34 ARG212:A.NE/2
DG47:E.O5'/2 2.66 ARG212:A.NH2/2
DT48:E.OP1/2 2.99 LYS334:A.N/2
DA54:E.OP2/2 3.14 ARG90:B.NH1/2
DA54:E.OP2/2 2.49 TYR100:B.OH/2
DA55:E.OP2/2 2.99 LYS93:B.N/2
DA55:E.OP2/2 2.45 THR96:B.OG1/2
DA56:E.OP1/2 2.58 SER234:B.OG/2
DA56:E.N7/2 3.21 ASN99:B.ND2/2
DA56:E.N6/2 3.16 ASN99:B.OD1/2
DG57:E.OP1/2 2.79 GLY214:B.N/2
DG57:E.O6/2 2.81 LYS95:B.NZ/2
DC58:E.OP1/2 2.63 THR306:B.OG1/2
DC58:E.OP1/2 2.83 HIS308:B.N/2
DC58:E.OP2/2 2.72 SER286:B.OG/2
DT59:E.OP1/2 3.31 ARG293:B.NH1/2
DG60:E.O6/2 2.81 ARG287:B.NH2/2
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:C.OP2/1 2.43 17:C/1 2.65 SER102:B.OG/1
DT11:C.O3'/1 2.89 20:C/1 3.03 ASP303:B.OD2/1
DT12:C.OP1/1 2.64 20:C/1 3.03 ASP303:B.OD2/1
DT12:C.O4'/1 3.11 19:C/1 2.96 ARG177:B.NH2/1
DG24:D.N3/1 3.05 26:A/1 2.95 ARG177:A.NH2/1
DC39:E.N4/1 3.26 23:A/1 2.74 ARG287:A.NH1/1
DT44:E.OP1/1 2.84 5:A/1 2.76 ALA138:A.N/1
DT44:E.OP1/1 2.84 5:A/1 3.36 ARG176:A.NH2/1
DT45:E.O4'/1 2.96 26:A/1 2.95 ARG177:A.NH2/1
DT48:E.OP1/1 2.95 10:A/1 2.95 ARG212:A.NH2/1
DT48:E.OP1/1 2.95 10:A/1 3.03 THR236:A.OG1/1
DT48:E.OP1/1 2.95 10:A/1 2.81 GLY332:A.O/1
DG57:E.OP2/1 2.93 6:B/1 2.52 SER282:B.OG/1
DG57:E.N3/1 2.78 19:C/1 2.96 ARG177:B.NH2/1
DT59:E.OP2/1 3.02 12:B/1 2.83 PHE307:B.N/1
DG9:C.OP2/2 2.43 17:C/2 2.65 SER102:B.OG/2
DT11:C.O3'/2 2.89 20:C/2 3.03 ASP303:B.OD2/2
DT12:C.OP1/2 2.64 20:C/2 3.03 ASP303:B.OD2/2
DT12:C.O4'/2 3.11 19:C/2 2.96 ARG177:B.NH2/2
DG24:D.N3/2 3.05 26:A/2 2.95 ARG177:A.NH2/2
DC39:E.N4/2 3.26 23:A/2 2.74 ARG287:A.NH1/2
DT44:E.OP1/2 2.84 5:A/2 2.76 ALA138:A.N/2
DT44:E.OP1/2 2.84 5:A/2 3.36 ARG176:A.NH2/2
DT45:E.O4'/2 2.96 26:A/2 2.95 ARG177:A.NH2/2
DT48:E.OP1/2 2.95 10:A/2 2.95 ARG212:A.NH2/2
DT48:E.OP1/2 2.95 10:A/2 3.03 THR236:A.OG1/2
DT48:E.OP1/2 2.95 10:A/2 2.81 GLY332:A.O/2
DG57:E.OP2/2 2.93 6:B/2 2.52 SER282:B.OG/2
DG57:E.N3/2 2.78 19:C/2 2.96 ARG177:B.NH2/2
DT59:E.OP2/2 3.02 12:B/2 2.83 PHE307:B.N/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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