Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT4:T.OP1/1 2.89 THR233:A.N/1
DT4:T.OP1/1 2.67 THR233:A.OG1/1
DT4:T.OP1/1 3.06 LYS234:A.N/1
DA5:T.OP1/1 3.31 LYS230:A.N/1
DA5:P.OP1/1 2.97 GLY107:A.N/1
DA5:P.OP1/1 2.73 ALA110:A.N/1
DA5:P.OP2/1 3.29 SER109:A.N/1
DT6:P.OP1/1 2.76 GLY105:A.N/1
DT6:P.OP1/1 3.31 ILE106:A.N/1
DT6:P.OP1/1 3.16 ILE106:A.O/1
DG7:P.OP1/1 2.99 ARG254:A.NH2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA2:T.N3/1 2.9 535:T/1 3.35 LYS234:A.NZ/1
DT3:T.O2/1 2.68 617:T/1 2.85 LYS234:A.NZ/1
DA5:T.O3'/1 2.99 596:A/1 2.89 ASN133:A.ND2/1
DA5:T.O3'/1 2.99 596:A/1 3.25 HIS135:A.N/1
DA4:P.OP1/1 3 613:A/1 2.85 GLN31:A.NE2/1
DG7:P.OP1/1 2.64 658:A/1 2.54 SER104:A.OG/1
DG7:P.O4'/1 2.98 661:A/1 2.52 LYS234:A.NZ/1
DG7:P.N3/1 3.15 661:A/1 2.52 LYS234:A.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text