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Nucleic atom dist Protein atom
DT4:T.OP1/1 2.89 GLU232:A.N/1
DT4:T.OP1/1 3.04 THR233:A.N/1
DT4:T.OP1/1 2.99 THR233:A.OG1/1
DA5:T.OP1/1 3.32 LYS230:A.N/1
DA5:P.OP1/1 2.69 ALA110:A.N/1
DA5:P.OP2/1 3.36 SER109:A.N/1
DT6:P.OP1/1 2.8 GLY105:A.N/1
DG7:P.OP1/1 3.2 ARG254:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:T.O2/1 2.58 617:T/1 2.9 LYS234:A.NZ/1
DA5:T.O3'/1 2.74 596:A/1 2.61 ASN133:A.ND2/1
DA5:T.O3'/1 2.74 596:A/1 3.32 HIS135:A.N/1
DA4:P.OP1/1 2.81 613:P/1 3.19 GLN31:A.NE2/1
DA4:P.OP1/1 2.69 614:P/1 3.24 SER109:A.OG/1
DT6:P.O2/1 3.18 661:A/1 2.71 LYS234:A.NZ/1
DG7:P.OP1/1 2.81 658:A/1 2.45 SER104:A.OG/1
DG7:P.O5'/1 3.08 657:A/1 2.88 ASP190:A.OD2/1
DG7:P.O5'/1 3.08 657:A/1 2.42 ARG254:A.NH2/1
DG7:P.N3/1 3.02 661:A/1 2.71 LYS234:A.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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