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Nucleic atom dist Protein atom
DT4:W.OP1/1 2.79 ARG169:A.N/1
DT4:W.OP1/1 2.96 ARG169:A.NH2/1
DT4:W.OP2/1 3.02 GLN170:A.N/1
DG5:W.N7/1 3.12 ARG180:A.NH1/1
DG5:W.O6/1 2.82 ARG180:A.NH2/1
DC6:W.N4/1 2.97 GLU181:A.OE1/1
DG10:X.OP1/1 2.66 VAL139:A.N/1
DA9:X.OP2/1 2.9 SER179:A.OG/1
DA9:X.OP2/1 2.34 THR182:A.OG1/1
DT8:X.OP1/1 3.03 LYS57:A.NZ/1
DC7:X.N4/1 3.18 GLU181:A.OE1/1
DT-1:X.OP1/1 3.05 LYS201:A.N/1
DT-2:X.OP1/1 2.77 LYS201:A.NZ/1
DT4:Y.OP1/1 2.82 ARG169:B.N/1
DT4:Y.OP1/1 2.87 ARG169:B.NH1/1
DT4:Y.OP2/1 3.13 GLN170:B.N/1
DG5:Y.N7/1 3.32 ARG180:B.NH1/1
DG5:Y.O6/1 2.85 ARG180:B.NH2/1
DC6:Y.N4/1 3.33 GLU181:B.OE1/1
DG10:Z.OP1/1 2.81 VAL139:B.N/1
DA9:Z.OP2/1 3.24 SER179:B.N/1
DA9:Z.OP2/1 2.54 THR182:B.OG1/1
DC7:Z.N4/1 2.81 GLU181:B.OE1/1
DT-1:Z.OP1/1 2.75 LYS201:B.N/1
DT-2:Z.OP1/1 2.96 LYS201:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:W.OP1/1 2.78 2635:A/1 2.66 THR168:A.OG1/1
DT4:W.OP2/1 3.01 11:W/1 3.14 ARG180:A.NH1/1
DT4:W.O5'/1 3.03 11:W/1 3.14 ARG180:A.NH1/1
DG5:W.OP1/1 2.73 10:W/1 2.9 ARG169:A.NE/1
DG5:W.OP1/1 2.73 10:W/1 3.03 GLY184:A.O/1
DG5:W.OP2/1 2.7 13:W/1 2.78 ARG180:A.O/1
DG10:X.OP2/1 2.45 14:X/1 3.06 THR140:A.N/1
DG10:X.OP2/1 2.45 14:X/1 2.81 THR140:A.OG1/1
DG10:X.OP2/1 2.69 2645:A/1 2.57 ARG185:A.NH1/1
DA9:X.OP1/1 2.41 26:X/1 3.02 GLY177:A.O/1
DG6:X.O6/1 2.88 20:X/1 3.02 ARG180:A.NH2/1
DA3:Y.OP1/1 2.6 26:Y/1 2.62 THR168:B.OG1/1
DT4:Y.OP2/1 3.01 13:Y/1 3.03 ARG180:B.NH1/1
DG5:Y.OP1/1 2.66 10:Y/1 2.95 ARG169:B.NE/1
DG5:Y.OP1/1 2.66 10:Y/1 2.95 GLY184:B.O/1
DG10:Z.OP2/1 2.39 43:Z/1 3.05 THR140:B.N/1
DG10:Z.OP2/1 2.39 43:Z/1 2.67 THR140:B.OG1/1
DG10:Z.OP2/1 2.86 3626:B/1 2.75 ARG185:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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